Literature DB >> 17227387

Properties of pyranose dehydrogenase purified from the litter-degrading fungus Agaricus xanthoderma.

Magdalena Kujawa1, Jindrich Volc, Petr Halada, Petr Sedmera, Christina Divne, Christoph Sygmund, Christian Leitner, Clemens Peterbauer, Dietmar Haltrich.   

Abstract

We purified an extracellular pyranose dehydrogenase (PDH) from the basidiomycete fungus Agaricus xanthoderma using ammonium sulfate fractionation and ion-exchange and hydrophobic interaction chromatography. The native enzyme is a monomeric glycoprotein (5% carbohydrate) containing a covalently bound FAD as its prosthetic group. The PDH polypeptide consists of 575 amino acids and has a molecular mass of 65 400 Da as determined by MALDI MS. On the basis of the primary structure of the mature protein, PDH is a member of the glucose-methanol-choline oxidoreductase family. We constructed a homology model of PDH using the 3D structure of glucose oxidase from Aspergillus niger as a template. This model suggests a novel type of bi-covalent flavinylation in PDH, 9-S-cysteinyl, 8-alpha-N3-histidyl FAD. The enzyme exhibits a broad sugar substrate tolerance, oxidizing structurally different aldopyranoses including monosaccharides and oligosaccharides as well as glycosides. Its preferred electron donor substrates are D-glucose, D-galactose, L-arabinose, and D-xylose. As shown by in situ NMR analysis, D-glucose and D-galactose are both oxidized at positions C2 and C3, yielding the corresponding didehydroaldoses (diketoaldoses) as the final reaction products. PDH shows no detectable activity with oxygen, and its reactivity towards electron acceptors is rather limited, reducing various substituted benzoquinones and complexed metal ions. The azino-bis-(3-ethylbenzthiazolin-6-sulfonic acid) cation radical and the ferricenium ion are the best electron acceptors, as judged by the catalytic efficiencies (k(cat)/K(m)). The enzyme may play a role in lignocellulose degradation.

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Year:  2007        PMID: 17227387     DOI: 10.1111/j.1742-4658.2007.05634.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  12 in total

1.  A Novel Colletotrichum graminicola Raffinose Oxidase in the AA5 Family.

Authors:  Martina Andberg; Filip Mollerup; Kirsti Parikka; Sanna Koutaniemi; Harry Boer; Minna Juvonen; Emma Master; Maija Tenkanen; Kristiina Kruus
Journal:  Appl Environ Microbiol       Date:  2017-09-29       Impact factor: 4.792

2.  Molecular cloning of three pyranose dehydrogenase-encoding genes from Agaricus meleagris and analysis of their expression by real-time RT-PCR.

Authors:  Roman Kittl; Christoph Sygmund; Petr Halada; Jindrich Volc; Christina Divne; Dietmar Haltrich; Clemens K Peterbauer
Journal:  Curr Genet       Date:  2007-12-20       Impact factor: 3.886

3.  Simple and efficient expression of Agaricus meleagris pyranose dehydrogenase in Pichia pastoris.

Authors:  Christoph Sygmund; Alexander Gutmann; Iris Krondorfer; Magdalena Kujawa; Anton Glieder; Beate Pscheidt; Dietmar Haltrich; Clemens Peterbauer; Roman Kittl
Journal:  Appl Microbiol Biotechnol       Date:  2011-11-13       Impact factor: 4.813

4.  Engineering of pyranose dehydrogenase for increased oxygen reactivity.

Authors:  Iris Krondorfer; Katharina Lipp; Dagmar Brugger; Petra Staudigl; Christoph Sygmund; Dietmar Haltrich; Clemens K Peterbauer
Journal:  PLoS One       Date:  2014-03-10       Impact factor: 3.240

5.  Molecular dynamics simulations give insight into D-glucose dioxidation at C2 and C3 by Agaricus meleagris pyranose dehydrogenase.

Authors:  Michael M H Graf; Urban Bren; Dietmar Haltrich; Chris Oostenbrink
Journal:  J Comput Aided Mol Des       Date:  2013-04-17       Impact factor: 3.686

6.  The 1.6 Å crystal structure of pyranose dehydrogenase from Agaricus meleagris rationalizes substrate specificity and reveals a flavin intermediate.

Authors:  Tien Chye Tan; Oliver Spadiut; Thanyaporn Wongnate; Jeerus Sucharitakul; Iris Krondorfer; Christoph Sygmund; Dietmar Haltrich; Pimchai Chaiyen; Clemens K Peterbauer; Christina Divne
Journal:  PLoS One       Date:  2013-01-09       Impact factor: 3.240

7.  Further insights into the catalytical properties of deglycosylated pyranose dehydrogenase from Agaricus meleagris recombinantly expressed in Pichia pastoris.

Authors:  Maria E Yakovleva; Anikó Killyéni; Oliver Seubert; Peter O Conghaile; Domhnall Macaodha; Dónal Leech; Christoph Gonaus; Ionel Catalin Popescu; Clemens K Peterbauer; Sven Kjellström; Lo Gorton
Journal:  Anal Chem       Date:  2013-09-25       Impact factor: 6.986

8.  Pyranose Dehydrogenase from Agaricus campestris and Agaricus xanthoderma: Characterization and Applications in Carbohydrate Conversions.

Authors:  Petra Staudigl; Iris Krondorfer; Dietmar Haltrich; Clemens K Peterbauer
Journal:  Biomolecules       Date:  2013-08-16

9.  Pyranose dehydrogenase ligand promiscuity: a generalized approach to simulate monosaccharide solvation, binding, and product formation.

Authors:  Michael M H Graf; Lin Zhixiong; Urban Bren; Dietmar Haltrich; Wilfred F van Gunsteren; Chris Oostenbrink
Journal:  PLoS Comput Biol       Date:  2014-12-11       Impact factor: 4.475

10.  Reaction of pyranose dehydrogenase from Agaricus meleagris with its carbohydrate substrates.

Authors:  Michael M H Graf; Jeerus Sucharitakul; Urban Bren; Dinh Binh Chu; Gunda Koellensperger; Stephan Hann; Paul G Furtmüller; Christian Obinger; Clemens K Peterbauer; Chris Oostenbrink; Pimchai Chaiyen; Dietmar Haltrich
Journal:  FEBS J       Date:  2015-09-11       Impact factor: 5.542

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