Literature DB >> 17211893

Characterization of a corrinoid protein involved in the C1 metabolism of strict anaerobic bacterium Moorella thermoacetica.

Amaresh Das1, Zheng-Qing Fu, Wolfram Tempel, Zhi-Jie Liu, Jessie Chang, Lirong Chen, Doowon Lee, Weihong Zhou, Hao Xu, Neil Shaw, John P Rose, Lars G Ljungdahl, Bi-Cheng Wang.   

Abstract

The strict anaerobic, thermophilic bacterium Moorella thermoacetica metabolizes C1 compounds for example CO(2)/H(2), CO, formate, and methanol into acetate via the Wood/Ljungdahl pathway. Some of the key steps in this pathway include the metabolism of the C1 compounds into the methyl group of methylenetetrahydrofolate (MTHF) and the transfer of the methyl group from MTHF to the methyl group of acetyl-CoA catalyzed by methyltransferase, corrinoid protein and CO dehydrogenase/acetyl CoA synthase. Recently, we reported the crystallization of a 25 kDa methanol-induced corrinoid protein from M. thermoacetica (Zhou et al., Acta Crystallogr F 2005; 61:537-540). In this study we analyzed the crystal structure of the 25 kDa protein and provide genetic and biochemical evidences supporting its role in the methanol metabolism of M. thermoacetia. The 25 kDa protein was encoded by orf1948 of contig 303 in the M. thermoacetica genome. It resembles similarity to MtaC the corrinoid protein of the methanol:CoM methyltransferase system of methane producing archaea. The latter enzyme system also contains two additional enzymes MtaA and MtaB. Homologs of MtaA and MtaB were found to be encoded by orf2632 of contig 303 and orf1949 of contig 309, respectively, in the M. thermoacetica genome. The orf1948 and orf1949 were co-transcribed from a single polycistronic operon. Metal analysis and spectroscopic data confirmed the presence of cobalt and the corrinoid in the purified 25 kDa protein. High resolution X-ray crystal structure of the purified 25 kDa protein revealed corrinoid as methylcobalamin with the imidazole of histidine as the alpha-axial ligand replacing benziimidazole, suggesting base-off configuration for the corrinoid. Methanol significantly activated the expression of the 25 kDa protein. Cyanide and nitrate inhibited methanol metabolism and suppressed the level of the 25 kDa protein. The results suggest a role of the 25 kDa protein in the methanol metabolism of M. thermoacetica. (c) 2007 Wiley-Liss, Inc.

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Year:  2007        PMID: 17211893     DOI: 10.1002/prot.21094

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  10 in total

Review 1.  Acetogenesis and the Wood-Ljungdahl pathway of CO(2) fixation.

Authors:  Stephen W Ragsdale; Elizabeth Pierce
Journal:  Biochim Biophys Acta       Date:  2008-08-27

Review 2.  Catalysis of methyl group transfers involving tetrahydrofolate and B(12).

Authors:  Stephen W Ragsdale
Journal:  Vitam Horm       Date:  2008       Impact factor: 3.421

3.  Growth inhibition of Sporomusa ovata by incorporation of benzimidazole bases into cobamides.

Authors:  Kenny C Mok; Michiko E Taga
Journal:  J Bacteriol       Date:  2013-02-15       Impact factor: 3.490

4.  Unusual complexes of trapped methanol with azacryptands.

Authors:  Md Alamgir Hossain; Musabbir A Saeed; Ganna Gryn'ova; Douglas R Powell; Jerzy Leszczynski
Journal:  CrystEngComm       Date:  2010-01-01       Impact factor: 3.545

Review 5.  Cobalamin-dependent and cobamide-dependent methyltransferases.

Authors:  Rowena G Matthews; Markos Koutmos; Supratim Datta
Journal:  Curr Opin Struct Biol       Date:  2008-12       Impact factor: 6.809

6.  The complete genome sequence of Moorella thermoacetica (f. Clostridium thermoaceticum).

Authors:  Elizabeth Pierce; Gary Xie; Ravi D Barabote; Elizabeth Saunders; Cliff S Han; John C Detter; Paul Richardson; Thomas S Brettin; Amaresh Das; Lars G Ljungdahl; Stephen W Ragsdale
Journal:  Environ Microbiol       Date:  2008-06-09       Impact factor: 5.491

Review 7.  Prerequisites for amplicon pyrosequencing of microbial methanol utilizers in the environment.

Authors:  Steffen Kolb; Astrid Stacheter
Journal:  Front Microbiol       Date:  2013-09-05       Impact factor: 5.640

8.  Structure of the cobalamin-binding protein of a putative O-demethylase from Desulfitobacterium hafniense DCB-2.

Authors:  Hanno Sjuts; Mark S Dunstan; Karl Fisher; David Leys
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-07-20

9.  Adaptation of the autotrophic acetogen Sporomusa ovata to methanol accelerates the conversion of CO2 to organic products.

Authors:  Pier-Luc Tremblay; Daniel Höglund; Anna Koza; Ida Bonde; Tian Zhang
Journal:  Sci Rep       Date:  2015-11-04       Impact factor: 4.379

10.  The deep-subsurface sulfate reducer Desulfotomaculum kuznetsovii employs two methanol-degrading pathways.

Authors:  Diana Z Sousa; Michael Visser; Antonie H van Gelder; Sjef Boeren; Mervin M Pieterse; Martijn W H Pinkse; Peter D E M Verhaert; Carsten Vogt; Steffi Franke; Steffen Kümmel; Alfons J M Stams
Journal:  Nat Commun       Date:  2018-01-16       Impact factor: 14.919

  10 in total

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