Literature DB >> 17208976

Ion leakage through transient water pores in protein-free lipid membranes driven by transmembrane ionic charge imbalance.

Andrey A Gurtovenko1, Ilpo Vattulainen.   

Abstract

We have employed atomic-scale molecular dynamics simulations to address ion leakage through transient water pores in protein-free phospholipid membranes. Our results for phospholipid membranes in aqueous solution with NaCl and KCl salts show that the formation of transient water pores and the consequent ion leakage can be induced and be driven by a transmembrane ionic charge imbalance, an inherent feature in living cells. These processes take place if the gradient is large enough to develop a sufficiently significant potential difference across the membrane. The transport of cations and anions through the water pores is then seen; it discharges the transmembrane potential, considerably reduces the size of a water pore, and makes the water pore metastable, leading eventually to its sealing. The ion transport is found to be sensitive to the type of ions. It turns out that Na(+) and Cl(-) ions leak through a membrane at approximately the same ratio despite the fact that Na(+) ions are expected to experience a lower potential barrier for the permeation through the pore. This is because of strong interactions of sodium ions with the carbonyl region of a phospholipid membrane as well as with lipid headgroups forming pore "walls," considerably slowing down the permeation of sodium ions. In contrast, we observed a pronounced selectivity of a phospholipid membrane to the permeation of potassium ions as compared to chloride ions: Potassium ions, being larger than sodium ions, interact only weakly with phospholipid headgroups, so that these interactions are not able to compensate for a large difference in free-energy barriers for permeation of K(+) and Cl(-) ions. These findings are found to be robust to a choice of force-field parameters for ions (tested by Gromacs and Charmm force-fields for ions). What is more, a potassium ion is found to be able to permeate a membrane along an alternate, "water-defect-mediated" pathway without actual formation of a pore. The "water-defect-mediated" leakage involves formation of a single water defect only and is found to be at least one order of magnitude faster than the pore-mediated ion leakage.

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Year:  2007        PMID: 17208976      PMCID: PMC1861780          DOI: 10.1529/biophysj.106.094797

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  32 in total

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7.  Molecular dynamics simulations of lipid bilayers: major artifacts due to truncating electrostatic interactions.

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Journal:  Biophys J       Date:  2003-09       Impact factor: 4.033

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10.  Molecular dynamics simulations of hydrophilic pores in lipid bilayers.

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  23 in total

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4.  Molecular model of a cell plasma membrane with an asymmetric multicomponent composition: water permeation and ion effects.

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5.  Probing Lipid Bilayers under Ionic Imbalance.

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Journal:  Cold Spring Harb Perspect Med       Date:  2016-11-01       Impact factor: 6.915

Review 8.  A lipocentric view of peptide-induced pores.

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Journal:  Eur Biophys J       Date:  2011-03-26       Impact factor: 1.733

9.  Membrane-mediated amyloid formation of PrP 106-126: A kinetic study.

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10.  Free energy for the permeation of Na(+) and Cl(-) ions and their ion-pair through a zwitterionic dimyristoyl phosphatidylcholine lipid bilayer by umbrella integration with harmonic fourier beads.

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Journal:  J Am Chem Soc       Date:  2009-02-11       Impact factor: 15.419

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