| Literature DB >> 14978711 |
Michael Patra1, Mikko Karttunen.
Abstract
In this article we compare different force fields that are widely used (Gromacs, Charmm-22/x-Plor, Charmm-27, Amber-1999, OPLS-AA) in biophysical simulations containing aqueous NaCl. We show that the uncertainties of the microscopic parameters of, in particular, sodium, and, to a lesser extent, chloride, translate into large differences in the computed radial-distribution functions. This uncertainty reflect the incomplete experimental knowledge of the structural properties of ionic aqueous solutions at finite molarity. We discuss possible implications on the computation of potential of mean force and effective potentials. Copyright 2004 Wiley Periodicals, Inc. J Comput Chem 25: 678-689, 2004Entities:
Year: 2004 PMID: 14978711 DOI: 10.1002/jcc.10417
Source DB: PubMed Journal: J Comput Chem ISSN: 0192-8651 Impact factor: 3.376