Literature DB >> 17208972

Photoinduced transformations in bacteriorhodopsin membrane monitored with optical microcavities.

Juraj Topolancik1, Frank Vollmer.   

Abstract

Photoinduced molecular transformations in a self-assembled bacteriorhodopsin (bR) monolayer are monitored by observing shifts in the near-infrared resonant wavelengths of linearly polarized modes circulating in a microsphere cavity. We quantify the molecular polarizability change upon all-trans to 13-cis isomerization and deprotonation of the chromophore retinal ( approximately -57 A(3)) and determine its orientation relative to the bR membrane ( approximately 61 degrees ). Our observations establish optical microcavities as a sensitive off-resonant spectroscopic tool for probing conformations and orientations of molecular self-assemblies and for measuring changes of molecular polarizability at optical frequencies. We provide a general estimate of the sensitivity of the technique and discuss possible applications.

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Year:  2007        PMID: 17208972      PMCID: PMC1861786          DOI: 10.1529/biophysj.106.098806

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  Ultralow-threshold Raman laser using a spherical dielectric microcavity.

Authors:  S M Spillane; T J Kippenberg; K J Vahala
Journal:  Nature       Date:  2002-02-07       Impact factor: 49.962

2.  Stark spectroscopy on photoactive yellow protein, E46Q, and a nonisomerizing derivative, probes photo-induced charge motion.

Authors:  L L Premvardhan; M A van der Horst; K J Hellingwerf; R van Grondelle
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

3.  Nonlinear optics and crystalline whispering gallery mode cavities.

Authors:  Vladimir S Ilchenko; Anatoliy A Savchenkov; Andrey B Matsko; Lute Maleki
Journal:  Phys Rev Lett       Date:  2004-01-29       Impact factor: 9.161

4.  Nanolayer characterization through wavelength multiplexing of a microsphere resonator.

Authors:  Mayumi Noto; Frank Vollmer; David Keng; Iwao Teraoka; Stephen Arnold
Journal:  Opt Lett       Date:  2005-03-01       Impact factor: 3.776

5.  Sensor based on an integrated optical microcavity.

Authors:  E Krioukov; D J W Klunder; A Driessen; J Greve; C Otto
Journal:  Opt Lett       Date:  2002-04-01       Impact factor: 3.776

6.  Coupled plasmon-waveguide resonators: a new spectroscopic tool for probing proteolipid film structure and properties.

Authors:  Z Salamon; H A Macleod; G Tollin
Journal:  Biophys J       Date:  1997-11       Impact factor: 4.033

Review 7.  Stark spectroscopy: applications in chemistry, biology, and materials science.

Authors:  G U Bublitz; S G Boxer
Journal:  Annu Rev Phys Chem       Date:  1997       Impact factor: 12.703

8.  Detection of conformational changes in an immobilized protein using surface plasmon resonance.

Authors:  H Sota; Y Hasegawa; M Iwakura
Journal:  Anal Chem       Date:  1998-05-15       Impact factor: 6.986

Review 9.  Chromophore reorientation during the photocycle of bacteriorhodopsin: experimental methods and functional significance.

Authors:  M P Heyn; B Borucki; H Otto
Journal:  Biochim Biophys Acta       Date:  2000-08-30

10.  Protein changes associated with reprotonation of the Schiff base in the photocycle of Asp96-->Asn bacteriorhodopsin. The MN intermediate with unprotonated Schiff base but N-like protein structure.

Authors:  J Sasaki; Y Shichida; J K Lanyi; A Maeda
Journal:  J Biol Chem       Date:  1992-10-15       Impact factor: 5.157

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  13 in total

1.  Label-free detection with high-Q microcavities: a review of biosensing mechanisms for integrated devices.

Authors:  Frank Vollmer; Lan Yang
Journal:  Nanophotonics       Date:  2012-12-06       Impact factor: 8.449

2.  Excitation of Cy5 in self-assembled lipid bilayers using optical microresonators.

Authors:  Lindsay M Freeman; Su Li; Yasaman Dayani; Hong-Seok Choi; Noah Malmstadt; Andrea M Armani
Journal:  Appl Phys Lett       Date:  2011-04-06       Impact factor: 3.791

Review 3.  Photonic Potential of Haloarchaeal Pigment Bacteriorhodopsin for Future Electronics: A Review.

Authors:  Ravi Ashwini; S Vijayanand; J Hemapriya
Journal:  Curr Microbiol       Date:  2017-06-02       Impact factor: 2.188

4.  Single-molecule nucleic acid interactions monitored on a label-free microcavity biosensor platform.

Authors:  Martin D Baaske; Matthew R Foreman; Frank Vollmer
Journal:  Nat Nanotechnol       Date:  2014-08-31       Impact factor: 39.213

5.  Whispering gallery mode sensors.

Authors:  Matthew R Foreman; Jon D Swaim; Frank Vollmer
Journal:  Adv Opt Photonics       Date:  2015-06-30       Impact factor: 20.107

Review 6.  Optics-Integrated Microfluidic Platforms for Biomolecular Analyses.

Authors:  Kathleen E Bates; Hang Lu
Journal:  Biophys J       Date:  2016-04-26       Impact factor: 4.033

7.  Optical microspherical resonators for biomedical sensing.

Authors:  Silvia Soria; Simone Berneschi; Massimo Brenci; Franco Cosi; Gualtiero Nunzi Conti; Stefano Pelli; Giancarlo C Righini
Journal:  Sensors (Basel)       Date:  2011-01-12       Impact factor: 3.576

Review 8.  High-Q optical sensors for chemical and biological analysis.

Authors:  Matthew S Luchansky; Ryan C Bailey
Journal:  Anal Chem       Date:  2011-11-23       Impact factor: 6.986

9.  Chemical-vapor-deposition-based polymer substrates for spatially resolved analysis of protein binding by imaging ellipsometry.

Authors:  Aftin M Ross; Di Zhang; Xiaopei Deng; Seiwon Laura Chang; Joerg Lahann
Journal:  Anal Chem       Date:  2011-01-12       Impact factor: 6.986

10.  Whispering gallery microresonators for second harmonic light generation from a low number of small molecules.

Authors:  J L Dominguez-Juarez; G Kozyreff; Jordi Martorell
Journal:  Nat Commun       Date:  2011-03-29       Impact factor: 14.919

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