| Literature DB >> 17197003 |
N Decaro1, M Campolo, G Elia, D Buonavoglia, M L Colaianni, A Lorusso, V Mari, C Buonavoglia.
Abstract
Four outbreaks of infectious canine hepatitis (ICH) occurring in Italy between 2001 and 2006 are reported. Three outbreaks were observed in animal shelters of southern Italy, whereas a fourth outbreak involved two purebred pups imported from Hungary few days before the onset of clinical symptoms. In all outbreaks canine adenovirus type 1 (CAV-1) was identified by virus isolation and PCR. In three outbreaks, other canine viral pathogens were detected, including canine distemper virus, canine parvovirus or canine coronavirus. The present study shows that CAV-1 is currently circulating in the Italian dog population and that vaccination is still required.Entities:
Mesh:
Year: 2007 PMID: 17197003 PMCID: PMC7111792 DOI: 10.1016/j.rvsc.2006.11.009
Source DB: PubMed Journal: Res Vet Sci ISSN: 0034-5288 Impact factor: 2.534
Oligonucleotides and PCR conditions used for detection of canine viral pathogens
| Virus | Test | Reference | Oligonucleotides | PCR conditions | Amplicon size or fluorescence signal |
|---|---|---|---|---|---|
| CAV-1/CAV-2 | PCR | HA1 (+), CGCGCTGAACATTACTACCTTGTC | 94 °C for 30 s | CAV-1, 508 bp | |
| HA2 (−), CCTAGAGCACTTCGTGTCCGCTT | 58 °C for 1 min | CAV-2, 1030 bp | |||
| 72 °C for 1 min | |||||
| MRV | RT-PCR | L1-rv5 (+), GCATCCATTGTAAATGACGAGTCTG | 94 °C for 30 s | 416 bp | |
| L1-rv6 (−), CTTGAGATTAGCTCTAGCATCTTCTG | 50 °C for 30 s | ||||
| 72 °C for 30 s | |||||
| MRV-1 | RT-PCR | S1-R1F (+), GGAGCTCGACACAGCAAATA | 94 °C for 30 s | 505 bp | |
| S1-R1R (−), GATGATTGACCCCTTGTGC | 53 °C for 30 s | ||||
| 72 °C for 30 s | |||||
| MRV-2 | RT-PCR | S1-R2F (+), CTCCCGTCACGGTTAATTTG | 94 °C for 30 s | 394 bp | |
| S1-R2R (−), GATGAGTCGCCACTGTGC | 53 °C for 30 s | ||||
| 72 °C for 30 s | |||||
| MRV-3 | RT-PCR | S1-R3F (+), TGGGACAACTTGAGACAGGA | 94 °C for 30 s | 326 bp | |
| S1-R3R (−), CTGAAGTCCACCRTTTTGWA | 53 °C for 30 s | ||||
| 72 °C for 30 s | |||||
| RV | RT-PCR | Beg9 (+), GGCTTTAAAAGAGAGAATTTCCGTCTGG | 94 °C for 1 min | 1060 bp | |
| End9 (−), GGTCACATCATACAATTCTAATCTAAG | 55 °C for 2 min | ||||
| 72 °C for 1 min | |||||
| CaCV | RT-PCR | 289 (+), TGACAATGTAATCATCACCATA | 94 °C for 1 min | 300–320 bp | |
| 290 (−), GATTACTCCAAGTGGGACTCCAC | 48 °C for 1 min | ||||
| 72 °C for 1 min | |||||
| FCV | RT-PCR | Cali 1 (+), AACCTGCGCTAACGTGCTTA | 94 °C for 1 min | 924 bp | |
| Cali 2 (−), CAGTGACAATACACCCAGAAG | 57 °C for 45 s | ||||
| 72 °C for 1 min | |||||
| CaHV-1 | PCR | CHV1 (+), TGCCGCTTTTATATAGATG | 94 °C for 1 min | 493 bp | |
| CHV2 (+), AAGCTGTGTAAAAGTTCGT | 53 °C for 1 min | ||||
| 72 °C for 1 min | |||||
| CPV-2 (all types) | Real-time PCR | CPV-For (+), AAACAGGAATTAACTATACTAATATATTTA | 94 °C for 15 s | FAM | |
| CPV-Rev (−), AAATTTGACCATTTGGATAAACT | 52 °C for 30 s | ||||
| CPV-Pb (+), FAM–TGGTCCTTTAACTGCATTAAATAATGTACC–TAMRA | 60 °C for 1 min | ||||
| CPV-2 (types 2a/2b) | Real-time PCR | CPVa/b-For (+), AGGAAGATATCCAGAAGGAGATTGGA | 94 °C for 15 s | CPV-2a, VIC | |
| CPVa/b-Rev (−), CCAATTGGATCTGTTGGTAGCAATACA | 60 °C for 1 min | CPV-2b, FAM | |||
| CPVa-Pb (+), VIC–CTTCCTGTAACAAATGATA–MGB | |||||
| CPVb1-Pb (+), FAM–CTTCCTGTAACAGATGATA–MGB | |||||
| CPV-2 (types 2b/2c) | Real-time PCR | CPVb/c-For (+), GAAGATATCCAGAAGGAGATTGGATTCA | 94 °C for 15 s | CPV-2b, FAM | |
| CPVb/c-Rev (−), ATGCAGTTAAAGGACCATAAGTATTAAATATATTAGTATAGTTAATTC | 60 °C for 1 min | CPV-2c, VIC | |||
| CPVb2-Pb (+), FAM–CCTGTAACAGATGATAAT–MGB | |||||
| CPVc-Pb (−), VIC–CCTGTAACAGAAGATAAT–MGB | |||||
| CDV | Real-time RT-PCR | CDV-F (+), AGCTAGTTTCATCTTAACTATCAAATT | 94 °C for 15 s | FAM | |
| CDV-r (+), TTAACTCTCCAGAAAACTCATGC | 48 °C for 30 s | ||||
| CDV-Pb (−), FAM–ACCCAAGAGCCGGATACATAGTTTCAATGC–TAMRA | 60 °C for 1 min | ||||
| CCoV | Real-time RT-PCR | CCoV-For (+), TTGATCGTTTTTATAACGGTTCTACAA | 94 °C for 15 s | FAM | |
| CCoV-Rev (−), AATGGGCCATAATAGCCACATAAT | 60 °C for 1 min | ||||
| CCoV-Pb (+), FAM–ACCTCAATTTAGCTGGTTCGTGTATGGCATT–TAMRA | |||||
| CCoV type I | Real-time RT-PCR | CCoVI-F (+), CGTTAGTGCACTTGGAAGAAGCT | 94 °C for 15 s | FAM | |
| CCoVI-R (−), ACCAGCCATTTTAAATCCTTCA | 53 °C for 30 s | ||||
| CCoVI-Pb (+), FAM–CCTCTTGAAGGTACACCAA–TAMRA | 60 °C for 1 min | ||||
| CCoV type II | Real-time RT-PCR | CCoVII-F (+), TAGTGCATTAGGAAGAAGCT | 94 °C for 15 s | FAM | |
| CCoVII-R (−), AGCAATTTTGAACCCTTC | 48 °C for 30 s | ||||
| CCoVII-Pb (+), FAM–CCTCTTGAAGGTGTGCC–TAMRA | 60 °C for 1 min |
CAV, canine adenovirus; MRV, mammalian reovirus; RV, rotavirus, CaCV, canine calicivirus; FCV, feline calicivirus; CaHV, canid herpesvirus; CPV, canine parvovirus; CDV, canine distemper virus; CCoV, canine coronavirus; +, sense; −, antisense.
PCR conditions are referred to 40 cycles of amplification consisting of denaturation, primer annealing and extension.
Real-time PCR with conventional TaqMan probes.
Real-time PCR with minor groove binder probes.
Fig. 1PCR assay for detection of CAV-1 and CAV-2. Lane 1, marker GeneRuler 1 kb DNA Ladder (MBI Fermentas GmbH, St. Leon-Rot, Germany). Lane 2, positive control for CAV-1 (508 bp, Pratelli et al., 2001). Lane 3, positive control for CAV-2 (1030 bp, Decaro et al., 2004a), Lane 4, negative control (rectal swab from a dog negative for CAV-1/CAV-2). Lanes 5–10, samples positive for CAV-1 (rectal swab, liver, spleen, kidney, lung, lymph node of a dog from outbreak no. 3).
Results of the molecular investigations on samples collected from the affected dogs
| Outbreak no. | CAV-1 | CAV-2 | CPV-2 | CDV | CaHV-1 | CCoV | MRV | RV | CVs |
|---|---|---|---|---|---|---|---|---|---|
| 1 | + | ND | ND | + | ND | ND | ND | ND | ND |
| 2 | + | ND | ND | ND | ND | ND | ND | ND | ND |
| 3 | + | ND | + | ND | ND | ND | ND | ND | ND |
| 4 | + | ND | ND | ND | ND | + | ND | ND | ND |
CAV, canine adenovirus; CPV, canine parvovirus; CDV, canine distemper virus; CaHV, canid herpesvirus; CCoV, canine coronavirus; MRV, mammalian reovirus; RV, rotavirus, CVs, canine and feline caliciviruses; +, positive; ND, not detected.
CPV-2c.
CCoV type II.