Literature DB >> 17191842

Exploratory studies to investigate a linked prebiotic origin of RNA and coded peptides.

Vinciane Borsenberger1, Michael A Crowe, Jörg Lehbauer, Jim Raftery, Madeleine Helliwell, Kajal Bhutia, Tony Cox, John D Sutherland.   

Abstract

An introduction to the premise that RNA and genetically coded proteins should not be viewed as etiologically discrete entities in the origin of life is presented. This premise follows from the mutual interdependence of RNA and coded proteins in biology and the lack of prebiotically plausible constitutional self-assembly processes leading to either polymeric species. The RNA:coded peptides subsystem and its informational core, the genetic code, are then analysed retrosynthetically to suggest a (replicative) synthesis involving the intermediacy of aminoacyl-RNA trimers (cf. Scheme 5). A number of potential candidate aminoacyl-RNA trimers are identified (23-26; Scheme 6) and a chemical strategy to assess their validity is outlined. Experimental investigation of potential aminoacylation chemistry, nucleobase assembly and phosphate activation rules out three of the trimers but suggests that 26 is worthy of further investigation.

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Year:  2004        PMID: 17191842     DOI: 10.1002/cbdv.200490020

Source DB:  PubMed          Journal:  Chem Biodivers        ISSN: 1612-1872            Impact factor:   2.408


  11 in total

Review 1.  Ribonucleotides.

Authors:  John D Sutherland
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-03-10       Impact factor: 10.005

2.  Prebiotic chemistry: a new modus operandi.

Authors:  Matthew W Powner; John D Sutherland
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

3.  Question 6: how did translation occur?

Authors:  Peter Strazewski
Journal:  Orig Life Evol Biosph       Date:  2007-06-26       Impact factor: 1.950

4.  A route to enantiopure RNA precursors from nearly racemic starting materials.

Authors:  Jason E Hein; Eric Tse; Donna G Blackmond
Journal:  Nat Chem       Date:  2011-08-07       Impact factor: 24.427

5.  'Oming in on RNA-protein interactions.

Authors:  John L Rinn; Jernej Ule
Journal:  Genome Biol       Date:  2014-01-31       Impact factor: 13.583

6.  Evolutionary importance of the intramolecular pathways of hydrolysis of phosphate ester mixed anhydrides with amino acids and peptides.

Authors:  Ziwei Liu; Damien Beaufils; Jean-Christophe Rossi; Robert Pascal
Journal:  Sci Rep       Date:  2014-12-11       Impact factor: 4.379

7.  Mixed Anhydride Intermediates in the Reaction of 5(4H)-Oxazolones with Phosphate Esters and Nucleotides.

Authors:  Ziwei Liu; Lukas Rigger; Jean-Christophe Rossi; John D Sutherland; Robert Pascal
Journal:  Chemistry       Date:  2016-08-18       Impact factor: 5.236

8.  How and why kinetics, thermodynamics, and chemistry induce the logic of biological evolution.

Authors:  Addy Pross; Robert Pascal
Journal:  Beilstein J Org Chem       Date:  2017-04-07       Impact factor: 2.883

9.  Interactions of Amino Acids and Aminoxazole Derivatives: Cocrystal Formation and Prebiotic Implications Enabled by Computational Analysis.

Authors:  Nieves Lavado; Juan García de la Concepción; Reyes Babiano; Pedro Cintas; Mark E Light
Journal:  Orig Life Evol Biosph       Date:  2019-07-20       Impact factor: 1.950

10.  Conversion of biosynthetic precursors of RNA to those of DNA by photoredox chemistry.

Authors:  Dougal J Ritson; John D Sutherland
Journal:  J Mol Evol       Date:  2014-04-16       Impact factor: 2.395

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