Literature DB >> 1718420

Assignment of the natural abundance 13C spectrum of proteins using 13C 1H-detected heteronuclear multiple-bond correlation NMR spectroscopy: structural information and stereospecific assignments from two- and three-bond carbon-hydrogen coupling constants.

P E Hansen1.   

Abstract

Proton-detected heteronuclear multiple-bond 1H-13C correlations (HMBC) previously have been used for assignment purposes in a variety of isotopically enriched proteins. In the present study it is demonstrated that the technique yields an almost complete assignment of the natural abundance 13C spectrum of the protein basic pancreatic trypsin inhibitor (BPTI). In addition, the technique permits additional 1H assignments to be made for this well-studied protein. The intensities of observed correlations permit rough estimates to be made of 2J(C,H) and 3J(C,H) coupling constants. These couplings can be used for conformational studies of both the side chains and the backbone. Intra- and interresidue coupling between C alpha H and the carbonyl carbon provides information about the backbone angles psi and phi. Side-chain conformations can be determined from both two- and three-bond carbon-hydrogen coupling constants. The present study of BPTI together with its known high-precision solution structure yields an experimental correlation between resonance intensities and secondary structure. The spectra show the potential of the method in analyzing 13C NMR spectra of nonenriched proteins. The method yields 13C NMR chemical shifts, which are versatile parameters to be used to monitor structural changes, titrations, etc.

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Year:  1991        PMID: 1718420     DOI: 10.1021/bi00107a014

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

1.  Measurement of two-bond JCOH alpha coupling constants in proteins uniformly enriched with 13C.

Authors:  G W Vuister; A Bax
Journal:  J Biomol NMR       Date:  1992-07       Impact factor: 2.835

2.  Assignment of the backbone carbonyl resonances in (15)N-labelled proteins with (13)C at natural abundance by a 2D triple-resonance correlation technique.

Authors:  S M Kristensen; M D Sørensen; J J Led
Journal:  J Biomol NMR       Date:  1995-06       Impact factor: 2.835

3.  Protein backbone angle restraints from searching a database for chemical shift and sequence homology.

Authors:  G Cornilescu; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

4.  The use of 1JC alpha H alpha coupling constants as a probe for protein backbone conformation.

Authors:  G W Vuister; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1993-01       Impact factor: 2.835

5.  (H)NCAHA and (H)CANNH experiments for the determination of the vicinal coupling constants related to the phi-torsion angle.

Authors:  F Löhr; H Rüterjans
Journal:  J Biomol NMR       Date:  1995-01       Impact factor: 2.835

6.  Identification of N-terminal helix capping boxes by means of 13C chemical shifts.

Authors:  A M Gronenborn; G M Clore
Journal:  J Biomol NMR       Date:  1994-05       Impact factor: 2.835

7.  Combined use of 13C chemical shift and 1H alpha-13C alpha heteronuclear NOE data in monitoring a protein NMR structure refinement.

Authors:  B Celda; C Biamonti; M J Arnau; R Tejero; G T Montelione
Journal:  J Biomol NMR       Date:  1995-02       Impact factor: 2.835

8.  Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

Authors:  S Grzesiek; A Bax
Journal:  J Biomol NMR       Date:  1993-03       Impact factor: 2.835

9.  An automated procedure for the assignment of protein 1HN, 15N, 13C alpha, 1H alpha, 13C beta and 1H beta resonances.

Authors:  M S Friedrichs; L Mueller; M Wittekind
Journal:  J Biomol NMR       Date:  1994-09       Impact factor: 2.835

10.  Oxytocin solution structure changes upon protonation of the N-terminus in dimethyl sulfoxide.

Authors:  T Kato; S Endo; T Fujiwara; K Nagayama
Journal:  J Biomol NMR       Date:  1993-11       Impact factor: 2.835

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