Literature DB >> 17178465

Roles of DNA polymerases in replication, repair, and recombination in eukaryotes.

Youri I Pavlov1, Polina V Shcherbakova, Igor B Rogozin.   

Abstract

The functioning of the eukaryotic genome depends on efficient and accurate DNA replication and repair. The process of replication is complicated by the ongoing decomposition of DNA and damage of the genome by endogenous and exogenous factors. DNA damage can alter base coding potential resulting in mutations, or block DNA replication, which can lead to double-strand breaks (DSB) and to subsequent chromosome loss. Replication is coordinated with DNA repair systems that operate in cells to remove or tolerate DNA lesions. DNA polymerases can serve as sensors in the cell cycle checkpoint pathways that delay cell division until damaged DNA is repaired and replication is completed. Eukaryotic DNA template-dependent DNA polymerases have different properties adapted to perform an amazingly wide spectrum of DNA transactions. In this review, we discuss the structure, the mechanism, and the evolutionary relationships of DNA polymerases and their possible functions in the replication of intact and damaged chromosomes, DNA damage repair, and recombination.

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Year:  2006        PMID: 17178465     DOI: 10.1016/S0074-7696(06)55002-8

Source DB:  PubMed          Journal:  Int Rev Cytol        ISSN: 0074-7696


  71 in total

1.  DNA polymerase δ and ζ switch by sharing accessory subunits of DNA polymerase δ.

Authors:  Andrey G Baranovskiy; Artem G Lada; Hollie M Siebler; Yinbo Zhang; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2012-03-30       Impact factor: 5.157

Review 2.  Measurements of spontaneous rates of mutations in the recent past and the near future.

Authors:  Fyodor A Kondrashov; Alexey S Kondrashov
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-27       Impact factor: 6.237

3.  A time-invariant principle of genome evolution.

Authors:  Subhajyoti De; M Madan Babu
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-06       Impact factor: 11.205

4.  Identification of flap structure-specific endonuclease 1 as a factor involved in long-term memory formation of aversive learning.

Authors:  Lorena Saavedra-Rodríguez; Adrinel Vázquez; Humberto G Ortiz-Zuazaga; Nataliya E Chorna; Fernando A González; Lissette Andrés; Karen Rodríguez; Fernando Ramírez; Alan Rodríguez; Sandra Peña de Ortiz
Journal:  J Neurosci       Date:  2009-05-06       Impact factor: 6.167

5.  Activity and fidelity of human DNA polymerase α depend on primer structure.

Authors:  Andrey G Baranovskiy; Vincent N Duong; Nigar D Babayeva; Yinbo Zhang; Youri I Pavlov; Karen S Anderson; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2018-03-19       Impact factor: 5.157

6.  A novel variant of DNA polymerase ζ, Rev3ΔC, highlights differential regulation of Pol32 as a subunit of polymerase δ versus ζ in Saccharomyces cerevisiae.

Authors:  Hollie M Siebler; Artem G Lada; Andrey G Baranovskiy; Tahir H Tahirov; Youri I Pavlov
Journal:  DNA Repair (Amst)       Date:  2014-05-10

7.  X-ray structure of the complex of regulatory subunits of human DNA polymerase delta.

Authors:  Andrey G Baranovskiy; Nigar D Babayeva; Victoria G Liston; Igor B Rogozin; Eugene V Koonin; Youri I Pavlov; Dmitry G Vassylyev; Tahir H Tahirov
Journal:  Cell Cycle       Date:  2008-10-04       Impact factor: 4.534

8.  Evidence for the involvement of human DNA polymerase N in the repair of DNA interstrand cross-links.

Authors:  Laura Zietlow; Leigh Anne Smith; Mika Bessho; Tadayoshi Bessho
Journal:  Biochemistry       Date:  2009-12-15       Impact factor: 3.162

9.  A nuclear family A DNA polymerase from Entamoeba histolytica bypasses thymine glycol.

Authors:  Guillermo Pastor-Palacios; Elisa Azuara-Liceaga; Luis G Brieba
Journal:  PLoS Negl Trop Dis       Date:  2010-08-10

10.  Evolution of DNA polymerases: an inactivated polymerase-exonuclease module in Pol epsilon and a chimeric origin of eukaryotic polymerases from two classes of archaeal ancestors.

Authors:  Tahir H Tahirov; Kira S Makarova; Igor B Rogozin; Youri I Pavlov; Eugene V Koonin
Journal:  Biol Direct       Date:  2009-03-18       Impact factor: 4.540

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