Literature DB >> 17177415

Calculation of vibronic couplings for phenoxyl/phenol and benzyl/toluene self-exchange reactions: implications for proton-coupled electron transfer mechanisms.

Jonathan H Skone1, Alexander V Soudackov, Sharon Hammes-Schiffer.   

Abstract

The vibronic couplings for the phenoxyl/phenol and the benzyl/toluene self-exchange reactions are calculated with a semiclassical approach, in which all electrons and the transferring hydrogen nucleus are treated quantum mechanically. In this formulation, the vibronic coupling is the Hamiltonian matrix element between the reactant and product mixed electronic-proton vibrational wavefunctions. The magnitude of the vibronic coupling and its dependence on the proton donor-acceptor distance can significantly impact the rates and kinetic isotope effects, as well as the temperature dependences, of proton-coupled electron transfer reactions. Both of these self-exchange reactions are vibronically nonadiabatic with respect to a solvent environment at room temperature, but the proton tunneling is electronically nonadiabatic for the phenoxyl/phenol reaction and electronically adiabatic for the benzyl/toluene reaction. For the phenoxyl/phenol system, the electrons are unable to rearrange fast enough to follow the proton motion on the electronically adiabatic ground state, and the excited electronic state is involved in the reaction. For the benzyl/toluene system, the electrons can respond virtually instantaneously to the proton motion, and the proton moves on the electronically adiabatic ground state. For both systems, the vibronic coupling decreases exponentially with the proton donor-acceptor distance for the range of distances studied. When the transferring hydrogen is replaced with deuterium, the magnitude of the vibronic coupling decreases and the exponential decay with distance becomes faster. Previous studies designated the phenoxyl/phenol reaction as proton-coupled electron transfer and the benzyl/toluene reaction as hydrogen atom transfer. In addition to providing insights into the fundamental physical differences between these two types of reactions, the present analysis provides a new diagnostic for differentiating between the conventionally defined hydrogen atom transfer and proton-coupled electron transfer reactions.

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Year:  2006        PMID: 17177415     DOI: 10.1021/ja0656548

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  31 in total

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Authors:  Todd F Markle; Adam L Tenderholt; James M Mayer
Journal:  J Phys Chem B       Date:  2011-12-23       Impact factor: 2.991

Review 2.  Proton-coupled electron transfer in DNA on formation of radiation-produced ion radicals.

Authors:  Anil Kumar; Michael D Sevilla
Journal:  Chem Rev       Date:  2010-05-05       Impact factor: 60.622

Review 3.  Proton-coupled electron transfer.

Authors:  My Hang V Huynh; Thomas J Meyer
Journal:  Chem Rev       Date:  2007-11       Impact factor: 60.622

4.  Dichotomous hydrogen atom transfer vs proton-coupled electron transfer during activation of X-H bonds (X = C, N, O) by nonheme iron-oxo complexes of variable basicity.

Authors:  Dandamudi Usharani; David C Lacy; A S Borovik; Sason Shaik
Journal:  J Am Chem Soc       Date:  2013-11-04       Impact factor: 15.419

Review 5.  Theory of coupled electron and proton transfer reactions.

Authors:  Sharon Hammes-Schiffer; Alexei A Stuchebrukhov
Journal:  Chem Rev       Date:  2010-11-04       Impact factor: 60.622

6.  Tyrosine oxidation in heme oxygenase: examination of long-range proton-coupled electron transfer.

Authors:  Valeriy V Smirnov; Justine P Roth
Journal:  J Biol Inorg Chem       Date:  2014-07-15       Impact factor: 3.358

7.  When electrons and protons get excited.

Authors:  Sharon Hammes-Schiffer
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-11       Impact factor: 11.205

8.  Proton-coupled electron transfer reactions: analytical rate constants and case study of kinetic isotope effects in lipoxygenase.

Authors:  Alexander V Soudackov; Sharon Hammes-Schiffer
Journal:  Faraday Discuss       Date:  2016-12-22       Impact factor: 4.008

9.  The Third Dimension of a More O'Ferrall-Jencks Diagram for Hydrogen Atom Transfer in the Isoelectronic Hydrogen Exchange Reactions of (PhX)(2)H(•) with X = O, NH, and CH(2).

Authors:  Alessandro Cembran; Makenzie R Provorse; Changwei Wang; Wei Wu; Jiali Gao
Journal:  J Chem Theory Comput       Date:  2012-09-04       Impact factor: 6.006

10.  Analysis of kinetic isotope effects for proton-coupled electron transfer reactions.

Authors:  Sarah J Edwards; Alexander V Soudackov; Sharon Hammes-Schiffer
Journal:  J Phys Chem A       Date:  2009-03-12       Impact factor: 2.781

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