Literature DB >> 17176329

In-frame triplet deletions in RHD alter the D antigen phenotype.

Willy A Flegel1, Nicole I Eicher, Andrea Doescher, Hein Hustinx, Peter Gowland, Behrouz Mansouri Taleghani, Eduard K Petershofen, Ursula Bauerfeind, Manfred Ernst, Ingeborg von Zabern, Hubert Schrezenmeier, Franz F Wagner.   

Abstract

BACKGROUND: The deletion of three adjacent nucleotides in an exon may cause the lack of a single amino acid, while the protein sequence remains otherwise unchanged. Only one such in-frame deletion is known in the two RH genes, represented by the RHCE allele ceBP expressing a "very weak e antigen." STUDY DESIGN AND METHODS: Blood donor samples were recognized because of discrepant results of D phenotyping. Six samples came from Switzerland and one from Northern Germany. The molecular structures were determined by genomic DNA nucleotide sequencing of RHD.
RESULTS: Two different variant D antigens were explained by RHD alleles harboring one in-frame triplet deletion each. Both single-amino-acid deletions led to partial D phenotypes with weak D antigen expression. Because of their D category V-like phenotypes, the RHD(Arg229del) allele was dubbed DVL-1 and the RHD(Lys235del) allele DVL-2. These in-frame triplet deletions are located in GAGAA or GAAGA repeats of the RHD exon 5.
CONCLUSION: Partial D may be caused by a single-amino-acid deletion in RhD. The altered RhD protein segments in DVL types are adjacent to the extracellular loop 4, which constitutes one of the most immunogenic parts of the D antigen. These RhD protein segments are also altered in all DV, which may explain the similarity in phenotype. At the nucleotide level, the triplet deletions may have resulted from replication slippage. A total of nine amino acid positions in an Rhesus protein may be affected by this mechanism.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 17176329     DOI: 10.1111/j.1537-2995.2006.01046.x

Source DB:  PubMed          Journal:  Transfusion        ISSN: 0041-1132            Impact factor:   3.157


  4 in total

1.  Mosaicism by somatic non-functional mutations: one cell lineage at a time.

Authors:  Willy Albert Flegel
Journal:  Haematologica       Date:  2019-03       Impact factor: 9.941

2.  D category IV: a group of clinically relevant and phylogenetically diverse partial D.

Authors:  Inge von Zabern; Franz F Wagner; Joann M Moulds; John J Moulds; Willy A Flegel
Journal:  Transfusion       Date:  2013-03-05       Impact factor: 3.157

Review 3.  Frameshift variations in the RHD coding sequence: Molecular mechanisms permitting protein expression.

Authors:  Willy A Flegel; Kshitij Srivastava
Journal:  Transfusion       Date:  2020-10-09       Impact factor: 3.337

4.  Local sequence determinants of two in-frame triplet deletion/duplication hotspots in the RHD/RHCE genes.

Authors:  Jian-Min Chen; David N Cooper; Claude Férec
Journal:  Hum Genomics       Date:  2012-08-02       Impact factor: 4.639

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.