Literature DB >> 17166746

Diffusion tensor imaging-based tissue segmentation: validation and application to the developing child and adolescent brain.

Khader M Hasan1, Christopher Halphen, Ambika Sankar, Thomas J Eluvathingal, Larry Kramer, Karla K Stuebing, Linda Ewing-Cobbs, Jack M Fletcher.   

Abstract

We present and validate a novel diffusion tensor imaging (DTI) approach for segmenting the human whole-brain into partitions representing grey matter (GM), white matter (WM) and cerebrospinal fluid (CSF). The approach utilizes the contrast among tissue types in the DTI anisotropy vs. diffusivity rotational invariant space. The DTI-based whole-brain GM and WM fractions (GMf and WMf) are contrasted with the fractions obtained from conventional magnetic resonance imaging (cMRI) tissue segmentation (or clustering) methods that utilized dual echo (proton density-weighted (PDw)), and spin-spin relaxation-weighted (T2w) contrast, in addition to spin-lattice relaxation weighted (T1w) contrasts acquired in the same imaging session and covering the same volume. In addition to good correspondence with cMRI estimates of brain volume, the DTI-based segmentation approach accurately depicts expected age vs. WM and GM volume-to-total intracranial brain volume percentage trends on the rapidly developing brains of a cohort of 29 children (6-18 years). This approach promises to extend DTI utility to both micro and macrostructural aspects of tissue organization.

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Year:  2006        PMID: 17166746      PMCID: PMC1995007          DOI: 10.1016/j.neuroimage.2006.10.029

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  60 in total

1.  Brain development during childhood and adolescence: a longitudinal MRI study.

Authors:  J N Giedd; J Blumenthal; N O Jeffries; F X Castellanos; H Liu; A Zijdenbos; T Paus; A C Evans; J L Rapoport
Journal:  Nat Neurosci       Date:  1999-10       Impact factor: 24.884

2.  Diffusion tensor MR imaging of the human brain.

Authors:  C Pierpaoli; P Jezzard; P J Basser; A Barnett; G Di Chiro
Journal:  Radiology       Date:  1996-12       Impact factor: 11.105

3.  Volumetric, connective, and morphologic changes in the brains of children with chromosome 22q11.2 deletion syndrome: an integrative study.

Authors:  Tony J Simon; Lijun Ding; Joel P Bish; Donna M McDonald-McGinn; Elaine H Zackai; James Gee
Journal:  Neuroimage       Date:  2005-01-08       Impact factor: 6.556

Review 4.  Diffusion MRI: precision, accuracy and flow effects.

Authors:  T E Conturo; R C McKinstry; J A Aronovitz; J J Neil
Journal:  NMR Biomed       Date:  1995 Nov-Dec       Impact factor: 4.044

5.  White matter changes with normal aging.

Authors:  C R Guttmann; F A Jolesz; R Kikinis; R J Killiany; M B Moss; T Sandor; M S Albert
Journal:  Neurology       Date:  1998-04       Impact factor: 9.910

6.  A technique for single-channel MR brain tissue segmentation: application to a pediatric sample.

Authors:  J C Rajapakse; J N Giedd; C DeCarli; J W Snell; A McLaughlin; Y C Vauss; A L Krain; S Hamburger; J L Rapoport
Journal:  Magn Reson Imaging       Date:  1996       Impact factor: 2.546

7.  Multispectral analysis of the temporal evolution of cerebral ischemia in the rat brain.

Authors:  R A Carano; F Li; K Irie; K G Helmer; M D Silva; M Fisher; C H Sotak
Journal:  J Magn Reson Imaging       Date:  2000-12       Impact factor: 4.813

8.  Cerebral magnetic resonance image segmentation using data fusion.

Authors:  J C Rajapakse; C DeCarli; A McLaughlin; J N Giedd; A L Krain; S D Hamburger; J L Rapoport
Journal:  J Comput Assist Tomogr       Date:  1996 Mar-Apr       Impact factor: 1.826

9.  Sex differences in brain gray and white matter in healthy young adults: correlations with cognitive performance.

Authors:  R C Gur; B I Turetsky; M Matsui; M Yan; W Bilker; P Hughett; R E Gur
Journal:  J Neurosci       Date:  1999-05-15       Impact factor: 6.167

10.  Cluster analysis of diffusion tensor magnetic resonance images in human head injury.

Authors:  D K Jones; R Dardis; M Ervine; M A Horsfield; M Jeffree; A Simmons; J Jarosz; A J Strong
Journal:  Neurosurgery       Date:  2000-08       Impact factor: 4.654

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  32 in total

1.  Diffusion tensor quantification of the relations between microstructural and macrostructural indices of white matter and reading.

Authors:  Richard E Frye; Jacqueline Liederman; Khader M Hasan; Alexis Lincoln; Benjamin Malmberg; John McLean; Andrew Papanicolaou
Journal:  Hum Brain Mapp       Date:  2010-07-27       Impact factor: 5.038

2.  Atlas-based analysis of neurodevelopment from infancy to adulthood using diffusion tensor imaging and applications for automated abnormality detection.

Authors:  Andreia V Faria; Jiangyang Zhang; Kenichi Oishi; Xin Li; Hangyi Jiang; Kazi Akhter; Laurent Hermoye; Seung-Koo Lee; Alexander Hoon; Elaine Stashinko; Michael I Miller; Peter C M van Zijl; Susumu Mori
Journal:  Neuroimage       Date:  2010-04-24       Impact factor: 6.556

3.  Diffusion tensor-based regional gray matter tissue segmentation using the international consortium for brain mapping atlases.

Authors:  Khader M Hasan; Richard E Frye
Journal:  Hum Brain Mapp       Date:  2011-01       Impact factor: 5.038

4.  Distinguishing and quantification of the human visual pathways using high-spatial-resolution diffusion tensor tractography.

Authors:  Arash Kamali; Khader M Hasan; Pavani Adapa; Azadeh Razmandi; Zafer Keser; John Lincoln; Larry A Kramer
Journal:  Magn Reson Imaging       Date:  2014-04-13       Impact factor: 2.546

5.  Mild Cognitive Impairment is Associated With White Matter Integrity Changes in Late-Myelinating Regions Within the Corpus Callosum.

Authors:  Nikki H Stricker; David H Salat; Taylor P Kuhn; Jessica M Foley; Jenessa S Price; Lars T Westlye; Michael S Esterman; Regina E McGlinchey; William P Milberg; Elizabeth C Leritz
Journal:  Am J Alzheimers Dis Other Demen       Date:  2015-04-22       Impact factor: 2.035

6.  Quantitative diffusion tensor imaging and intellectual outcomes in spina bifida: laboratory investigation.

Authors:  Khader M Hasan; Ambika Sankar; Christopher Halphen; Larry A Kramer; Linda Ewing-Cobbs; Maureen Dennis; Jack M Fletcher
Journal:  J Neurosurg Pediatr       Date:  2008-07       Impact factor: 2.375

Review 7.  Application of advanced neuroimaging modalities in pediatric traumatic brain injury.

Authors:  Stephen Ashwal; Karen A Tong; Nirmalya Ghosh; Brenda Bartnik-Olson; Barbara A Holshouser
Journal:  J Child Neurol       Date:  2014-06-22       Impact factor: 1.987

8.  DTI-based segmentation and quantification of human brain lateral ventricular CSF volumetry and mean diffusivity: validation, age, gender effects and biophysical implications.

Authors:  Khader M Hasan; F Gerard Moeller; Ponnada A Narayana
Journal:  Magn Reson Imaging       Date:  2014-01-29       Impact factor: 2.546

9.  Diffusion tensor tractography quantification of the human corpus callosum fiber pathways across the lifespan.

Authors:  Khader M Hasan; Arash Kamali; Amal Iftikhar; Larry A Kramer; Andrew C Papanicolaou; Jack M Fletcher; Linda Ewing-Cobbs
Journal:  Brain Res       Date:  2008-10-28       Impact factor: 3.252

10.  Semi-automated 3D segmentation of major tracts in the rat brain: comparing DTI with standard histological methods.

Authors:  Erika Gyengesi; Evan Calabrese; Matthew C Sherrier; G Allan Johnson; George Paxinos; Charles Watson
Journal:  Brain Struct Funct       Date:  2013-03-01       Impact factor: 3.270

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