Literature DB >> 17165888

Density functional theory study of 14N isotropic hyperfine coupling constants of organic radicals.

L Hermosilla1, P Calle, J M García de la Vega, C Sieiro.   

Abstract

Nitrogen hyperfine coupling constants (hfccs) of organic radicals have been calculated by density functional theory (DFT) methodology. The capability of the B3LYP functional, combined with 6-31G*, TZVP and EPR-III basis sets, to reproduce experimental nitrogen coupling constant data has been analyzed for 109 neutral, cationic and anionic radicals, all of them containing at least one nitrogen atom. The results indicate that the selection of the basis set plays an important role in the accuracy of DFT calculations of hfccs, mainly in relation with the composition of the primitive functions and the quantum number of those functions. The main conclusion obtained is the high reliability of the scheme B3LYP/6-31G* for the prediction of nitrogen hfccs with very low computational cost.

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Year:  2006        PMID: 17165888     DOI: 10.1021/jp064900z

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  13 in total

1.  Prototropic equilibria in DNA containing one-electron oxidized GC: intra-duplex vs. duplex to solvent deprotonation.

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2.  Formation of S-Cl phosphorothioate adduct radicals in dsDNA S-oligomers: hole transfer to guanine vs disulfide anion radical formation.

Authors:  Amitava Adhikary; Anil Kumar; Brian J Palmer; Andrew D Todd; Michael D Sevilla
Journal:  J Am Chem Soc       Date:  2013-08-14       Impact factor: 15.419

3.  π- vs σ-radical states of one-electron-oxidized DNA/RNA bases: a density functional theory study.

Authors:  Anil Kumar; Michael D Sevilla
Journal:  J Phys Chem B       Date:  2013-09-19       Impact factor: 2.991

4.  Hydroxyl ion addition to one-electron oxidized thymine: unimolecular interconversion of C5 to C6 OH-adducts.

Authors:  Amitava Adhikary; Anil Kumar; Alicia N Heizer; Brian J Palmer; Venkata Pottiboyina; Yong Liang; Stanislaw F Wnuk; Michael D Sevilla
Journal:  J Am Chem Soc       Date:  2013-02-14       Impact factor: 15.419

5.  Formation of aminyl radicals on electron attachment to AZT: abstraction from the sugar phosphate backbone versus one-electron oxidation of guanine.

Authors:  Amitava Adhikary; Deepti Khanduri; Venkata Pottiboyina; Cory T Rice; Michael D Sevilla
Journal:  J Phys Chem B       Date:  2010-07-22       Impact factor: 2.991

6.  Performance of DFT methods in the calculation of isotropic and dipolar contributions to 14N hyperfine coupling constants of nitroxide radicals.

Authors:  Oleg I Gromov; Sergei V Kuzin; Elena N Golubeva
Journal:  J Mol Model       Date:  2019-03-11       Impact factor: 1.810

7.  Direct formation of the C5'-radical in the sugar-phosphate backbone of DNA by high-energy radiation.

Authors:  Amitava Adhikary; David Becker; Brian J Palmer; Alicia N Heizer; Michael D Sevilla
Journal:  J Phys Chem B       Date:  2012-05-14       Impact factor: 2.991

8.  Effect of base stacking on the acid-base properties of the adenine cation radical [A*+] in solution: ESR and DFT studies.

Authors:  Amitava Adhikary; Anil Kumar; Deepti Khanduri; Michael D Sevilla
Journal:  J Am Chem Soc       Date:  2008-07-09       Impact factor: 15.419

9.  Photoexcitation of adenine cation radical [A*+] in the near UV-vis region produces sugar radicals in adenosine and in its nucleotides.

Authors:  Amitava Adhikary; Deepti Khanduri; Anil Kumar; Michael D Sevilla
Journal:  J Phys Chem B       Date:  2008-12-11       Impact factor: 2.991

10.  One-electron oxidation of neutral sugar radicals of 2'-deoxyguanosine and 2'-deoxythymidine: a density functional theory (DFT) study.

Authors:  Anil Kumar; Venkata Pottiboyina; Michael D Sevilla
Journal:  J Phys Chem B       Date:  2012-07-27       Impact factor: 2.991

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