| Literature DB >> 17163998 |
Seema Bhaskar1, D N Reddy, Swapna Mahurkar, G V Rao, Lalji Singh, Giriraj R Chandak.
Abstract
BACKGROUND: The genetic basis of tropical calcific pancreatitis (TCP) is different and is explained by mutations in the pancreatic secretory trypsin inhibitor (SPINK1) gene. However, mutated SPINK1 does not account for the disease in all the patients, neither does it explain the phenotypic heterogeneity between TCP and fibro-calculous pancreatic diabetes (FCPD). Recent studies suggest a crucial role for pancreatic renin-angiotensin system during chronic hypoxia in acute pancreatitis and for angiotensin converting enzyme (ACE) inhibitors in reducing pancreatic fibrosis in experimental models. We investigated the association of ACE gene insertion/deletion (I/D) polymorphism in TCP patients using a case-control approach. Since SPINK1 mutations are proposed a modifier role, we also investigated its interaction with the ACE gene variant.Entities:
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Year: 2006 PMID: 17163998 PMCID: PMC1762011 DOI: 10.1186/1471-230X-6-42
Source DB: PubMed Journal: BMC Gastroenterol ISSN: 1471-230X Impact factor: 3.067
Figure 1Agarose gel electrophoresis showing genotypes at in/del polymorphism in the ACE gene (g.11417_11704del287). Lanes 1 & 13 represent DNA marker XIV (New England Biolabs, USA) and marker V (Boerhinger Manheim, Germany), Lane 2:Control for genotype ID, Lane 3:Control for genotype II, Lane 4:Control for genotype DD. Lanes 5, 8, 10 show II genotype, lanes 7 and 12 are ID genotypes and lanes 6, 9, 11 carry the DD genotype. bp, base-pair
Characteristics of the study population
| 91 | 80 | 171 | |
| 61 M/30 F | 59 M/21 F | 120 M/51 F | |
| 25.8 (23.5–28.1) | 32.6 (29.6–35.6) | 28.0 (26.0–30.0) | |
| 33.9 (31.6–36.2) | 40.9 (37.8–44.0) | 36.4 (34.4–38.4) | |
| 8.8 (7.5–10.1) | 10.0 (8.4–11.6) | 9.3 (8.3–10.3) | |
| NA | 33.8 (31.0–36.6) | NA | |
| NA | 7.2 (5.8–8.6) | NA |
n, number of patients; yrs, years; TCP, tropical calcific pancreatitis; FCPD, fibro-calculous pancreatic diabetes
NA, not applicable; Figures are quoted as median, range 95% CI
Allele frequency and genotype distribution of I/D polymorphism at ACE locus in TCP patients & control subjects
| 91 | 80 | 171 | 99 | - | - | - | |
| | 0.56 | 0.52 | 0.54 | 0.53 | 0.57 | 0.67 | 0.89 |
| | 0.44 | 0.48 | 0.46 | 0.47 | |||
| | 0.33 (30) | 0.24 (19) | 0.29 (49) | 0.26 (26) | 0.16 | 0.28 | 0.74 |
| | 0.67 (61) | 0.76 (61) | 0.71 (122) | 0.74 (73) | |||
n, number of individuals; TCP, tropical calcific pancreatitis; FCPD, fibro-calculous pancreatic diabetes; ACE, angiotensin converting enzyme; I/D, insertion/deletion polymorphism at ACE locus figures in parentheses indicate number of individuals; P values are represented on comparison of TCP with FCPD, TCP with controls and FCPD with controls.
Clinical features of TCP and FCPD patients grouped according to their genotype at in/del polymorphism at ACE gene
| 30 | 61 | - | 19 | 61 | - | 49 | 122 | - | |
| 22/8 | 39/22 | - | 17/2 | 42/19 | - | 39/10 | 81/41 | - | |
| 25.7 ± 11.1 | 24.8 ± 11.8 | 0.72 | 34.4 ± 15.1 | 31.2 ± 12.9 | 0.37 | 29.0 ± 13.3 | 28.0 ± 12.7 | 0.64 | |
| 36.2 ± 11.8 | 32.7 ± 10.9 | 0.16 | 40.3 ± 17.0 | 38.9 ± 13.9 | 0.72 | 37.8 ± 14.0 | 35.8 ± 12.9 | 0.37 | |
| NA | NA | NA | 34.2 ± 13.9 | 33.7 ± 11.44 | 0.88 | 34.2 ± 13.9 | 33.7 ± 11.4 | 0.81 | |
| 11 (36.67%) | 24 (40%) | 0.76 | 2 (10.53%) | 4 (6.56%) | 0.57 | 13 (26.53%) | 28 (23.14%) | 0.64 | |
| 30 (100%) | 61 (100%) | 1 | 19 (100) | 61 (100) | 1 | 49 (100) | 122 (100) | 1 | |
| 2 (6.67%) | 4 (6.6%) | 1 | 0 (0%) | 1 (1.64) | 1 | 2 (4.08%) | 5 (4.13%) | 1 | |
n, number of individuals; TCP, tropical calcific pancreatitis; FCPD, fibro-calculous pancreatic diabetes; ACE, angiotensin converting enzyme
I/D, insertion/deletion polymorphism at ACE locus; NA, not applicable; figures in parentheses indicate percentage; figures are quoted as mean ± SD
P values are represented on comparison of II vs ID+DD genotypes in TCP, FCPD and total patients
Allele frequency and genotype distribution of I/D polymorphism at ACE locus in TCP patients and controls based on their N34S SPINK1 status
| 31 | 60 | 21 | 59 | 52 | 119 | 3 | 96 | ||||
| | 0.60 | 0.54 | 0.39 | 0.55 | 0.51 | 0.57 | 0.58 | 0.53 | 0.48 | 0.67 | 0.53 |
| | 0.40 | 0.46 | 0.45 | 0.49 | 0.42 | 0.47 | 0.33 | 0.47 | |||
| | 0.36 (11) | 0.32 (19) | 0.55 | 0.29 (06) | 0.22 (13) | 0.26 | 0.33 (17) | 0.27 (32) | 0.35 | 0.33 (01) | 0.26 (25) |
| | 0.64 (20) | 0.68 (41) | 0.71 (15) | 0.78 (46) | 0.67 (35) | 0.73 (87) | 0.67 (02) | 0.74 (71) | |||
n, number of individuals; TCP, tropical calcific pancreatitis; FCPD, fibro-calculous pancreatic diabetes; ACE, angiotensin converting enzyme; I/D, insertion/deletion polymorphism at ACE locus figures in parentheses indicate number of individuals; P value is represented on comparison of N34S SPINK1 positive vs. N34S negative TCP, FCPD and total patients.
*, includes 9 N34S SPINK1 homozygotes and 22 heterozygotes; # includes 4 N34S SPINK1 homozygotes and 17 heterozygotes, $, includes 3 N34S SPINK1 heterozygotes