Literature DB >> 17160039

Reproducibility Probability Score--incorporating measurement variability across laboratories for gene selection.

Guixian Lin, Xuming He, Hanlee Ji, Leming Shi, Ronald W Davis, Sheng Zhong.   

Abstract

Mesh：

Year:  2006        PMID： 17160039     DOI： 10.1038/nbt1206-1476

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


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  21 in total

1.  Inference on Low-Rank Data Matrices with Applications to Microarray Data.

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2.  The phosphatidic acid phosphatase lipin-1 facilitates inflammation-driven colon carcinogenesis.

Authors:  Clara Meana; Ginesa García-Rostán; Lucía Peña; Gema Lordén; África Cubero; Antonio Orduña; Balázs Győrffy; Jesús Balsinde; María A Balboa
Journal:  JCI Insight       Date:  2018-09-20

3.  Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.

Authors:  Martin J Aryee; Andrew E Jaffe; Hector Corrada-Bravo; Christine Ladd-Acosta; Andrew P Feinberg; Kasper D Hansen; Rafael A Irizarry
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4.  Optimized ranking and selection methods for feature selection with application in microarray experiments.

Authors:  Xinping Cui; Haibing Zhao; Jason Wilson
Journal:  J Biopharm Stat       Date:  2010-03       Impact factor: 1.051

5.  Downregulation of LRRC19 Is Associated with Poor Prognosis in Colorectal Cancer.

Authors:  Ya-Juan Wang; Man Liu; Hui-Ying Jiang; Yong-Wei Yu
Journal:  J Oncol       Date:  2022-06-26       Impact factor: 4.501

6.  Reproducibility enhancement and differential expression of non predefined functional gene sets in human genome.

Authors:  Samoel R M da Silva; Gabriel C Perrone; João M Dinis; Rita M C de Almeida
Journal:  BMC Genomics       Date:  2014-12-24       Impact factor: 3.969

7.  Combined evaluation of hexokinase 2 and phosphorylated pyruvate dehydrogenase-E1α in invasive front lesions of colorectal tumors predicts cancer metabolism and patient prognosis.

Authors:  Atsushi Hamabe; Hirofumi Yamamoto; Masamitsu Konno; Mamoru Uemura; Junichi Nishimura; Taishi Hata; Ichiro Takemasa; Tsunekazu Mizushima; Naohiro Nishida; Koichi Kawamoto; Jun Koseki; Yuichiro Doki; Masaki Mori; Hideshi Ishii
Journal:  Cancer Sci       Date:  2014-09-16       Impact factor: 6.716

8.  Integrative ChIP-seq/microarray analysis identifies a CTNNB1 target signature enriched in intestinal stem cells and colon cancer.

Authors:  Kazuhide Watanabe; Jacob Biesinger; Michael L Salmans; Brian S Roberts; William T Arthur; Michele Cleary; Bogi Andersen; Xiaohui Xie; Xing Dai
Journal:  PLoS One       Date:  2014-03-20       Impact factor: 3.240

9.  Microarray labeling extension values: laboratory signatures for Affymetrix GeneChips.

Authors:  Yun-Shien Lee; Chun-Houh Chen; Chi-Neu Tsai; Chia-Lung Tsai; Angel Chao; Tzu-Hao Wang
Journal:  Nucleic Acids Res       Date:  2009-03-18       Impact factor: 16.971

10.  Cross-species microarray analysis with the OSCAR system suggests an INSR->Pax6->NQO1 neuro-protective pathway in aging and Alzheimer's disease.

Authors:  Yue Lu; Xin He; Sheng Zhong
Journal:  Nucleic Acids Res       Date:  2007-06-01       Impact factor: 16.971
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