Literature DB >> 17153934

Proximity ligation: a specific and versatile tool for the proteomic era.

Ola Söderberg1, Karl-Johan Leuchowius, Masood Kamali-Moghaddam, Malin Jarvius, Sigrun Gustafsdottir, Edith Schallmeiner, Mats Gullberg, Jonas Jarvius, Ulf Landegren.   

Abstract

Knowledge about the total human genome sequence now provides opportunities to study its myriad gene products. However, the presence of alternative splicing, post-translational modifications, and innumerable protein-protein interactions among proteins occurring at widely different concentrations, all combine to place extreme demands on the specificity and sensitivity of assays. The choice of method also depends on matters such as whether proteins will be analyzed in body fluids and lysates, or localized inside single cells. In this review we discuss commonly used detection methods and compare these to the recently-developed proximity ligation technique.

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Year:  2007        PMID: 17153934     DOI: 10.1007/978-0-387-34504-8_5

Source DB:  PubMed          Journal:  Genet Eng (N Y)        ISSN: 0196-3716


  14 in total

1.  Molecular pincers: antibody-based homogeneous protein sensors.

Authors:  Ewa Heyduk; Benjamin Dummit; Yie-Hwa Chang; Tomasz Heyduk
Journal:  Anal Chem       Date:  2008-05-21       Impact factor: 6.986

2.  SCF-FBXO31 E3 ligase targets DNA replication factor Cdt1 for proteolysis in the G2 phase of cell cycle to prevent re-replication.

Authors:  Pegah Johansson; Jessie Jeffery; Fares Al-Ejeh; Renèe B Schulz; David F Callen; Raman Kumar; Kum Kum Khanna
Journal:  J Biol Chem       Date:  2014-05-14       Impact factor: 5.157

3.  Fasciola hepatica fatty acid binding protein inhibits TLR4 activation and suppresses the inflammatory cytokines induced by lipopolysaccharide in vitro and in vivo.

Authors:  Ivelisse Martin; Kimberly Cabán-Hernández; Olgary Figueroa-Santiago; Ana M Espino
Journal:  J Immunol       Date:  2015-03-16       Impact factor: 5.422

Review 4.  From modules to medicine: How modular domains and their associated networks can enable personalized medicine.

Authors:  Eric B Haura
Journal:  FEBS Lett       Date:  2012-05-07       Impact factor: 4.124

5.  Local protein kinase A action proceeds through intact holoenzymes.

Authors:  F Donelson Smith; Jessica L Esseltine; Patrick J Nygren; David Veesler; Dominic P Byrne; Matthias Vonderach; Ilya Strashnov; Claire E Eyers; Patrick A Eyers; Lorene K Langeberg; John D Scott
Journal:  Science       Date:  2017-06-23       Impact factor: 47.728

6.  On the g-protein-coupled receptor heteromers and their allosteric receptor-receptor interactions in the central nervous system: focus on their role in pain modulation.

Authors:  Dasiel O Borroto-Escuela; Wilber Romero-Fernandez; Alicia Rivera; Kathleen Van Craenenbroeck; Alexander O Tarakanov; Luigi F Agnati; Kjell Fuxe
Journal:  Evid Based Complement Alternat Med       Date:  2013-07-17       Impact factor: 2.629

7.  Significant role of Psf3 expression in non-small-cell lung cancer.

Authors:  Shinya Tane; Yasuhiro Sakai; Daisuke Hokka; Hiromichi Okuma; Hiroyuki Ogawa; Yugo Tanaka; Kazuya Uchino; Wataru Nishio; Masahiro Yoshimura; Yoshimasa Maniwa
Journal:  Cancer Sci       Date:  2015-10-07       Impact factor: 6.716

8.  Phosphorylation of mouse melanopsin by protein kinase A.

Authors:  Joseph R Blasic; R Lane Brown; Phyllis R Robinson
Journal:  PLoS One       Date:  2012-09-26       Impact factor: 3.240

Review 9.  Rho GTPase isoforms in cell motility: Don't fret, we have FRET.

Authors:  Sara K Donnelly; Jose Javier Bravo-Cordero; Louis Hodgson
Journal:  Cell Adh Migr       Date:  2014       Impact factor: 3.405

Review 10.  Proximity assays for sensitive quantification of proteins.

Authors:  Christina Greenwood; David Ruff; Sara Kirvell; Gemma Johnson; Harvinder S Dhillon; Stephen A Bustin
Journal:  Biomol Detect Quantif       Date:  2015-05-20
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