Literature DB >> 17147746

Plant genome archaeology: evidence for conserved ancestral chromosome segments in dicotyledonous plant species.

Isabelle Dominguez1, Enrique Graziano, Christiane Gebhardt, Abdelali Barakat, Simon Berry, Pere Arús, Michel Delseny, Stephen Barnes.   

Abstract

We have developed genetic maps, based on expressed sequence tags (ESTs) that are homologous to Arabidopsis genes, in four dicotyledonous crop plant species from different families. A comparison of these maps with the physical map of Arabidopsis reveals common genome segments that appear to have been conserved throughout the evolution of the dicots. In the four crop species analysed these segments comprise between 16 and 33% of the Arabidopsis genome. Our findings extend the synteny patterns previously observed only within plant families, and indicate that structural and functional information from the model species will be, at least in part, applicable in crop plants with large genomes.

Entities:  

Year:  2003        PMID: 17147746     DOI: 10.1046/j.1467-7652.2003.00009.x

Source DB:  PubMed          Journal:  Plant Biotechnol J        ISSN: 1467-7644            Impact factor:   9.803


  21 in total

1.  Comparative mapping and marker-assisted selection in Rosaceae fruit crops.

Authors:  Elisabeth Dirlewanger; Enrique Graziano; Tarek Joobeur; Francesc Garriga-Calderé; Patrick Cosson; Werner Howad; Pere Arús
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-24       Impact factor: 11.205

2.  Exploiting synteny in Cucumis for mapping of Psm: a unique locus controlling paternal mitochondrial sorting.

Authors:  Sulieman Al-Faifi; Jenelle D F Meyer; Jordi Garcia-Mas; Antonio J Monforte; Michael J Havey
Journal:  Theor Appl Genet       Date:  2008-06-03       Impact factor: 5.699

Review 3.  Multiple models for Rosaceae genomics.

Authors:  Vladimir Shulaev; Schuyler S Korban; Bryon Sosinski; Albert G Abbott; Herb S Aldwinckle; Kevin M Folta; Amy Iezzoni; Dorrie Main; Pere Arús; Abhaya M Dandekar; Kim Lewers; Susan K Brown; Thomas M Davis; Susan E Gardiner; Daniel Potter; Richard E Veilleux
Journal:  Plant Physiol       Date:  2008-05-16       Impact factor: 8.340

4.  Ancestral synteny shared between distantly-related plant species from the asterid (Coffea canephora and Solanum Sp.) and rosid (Vitis vinifera) clades.

Authors:  Romain Guyot; Florent Lefebvre-Pautigny; Christine Tranchant-Dubreuil; Michel Rigoreau; Perla Hamon; Thierry Leroy; Serge Hamon; Valérie Poncet; Dominique Crouzillat; Alexandre de Kochko
Journal:  BMC Genomics       Date:  2012-03-20       Impact factor: 3.969

5.  Analyses of synteny between Arabidopsis thaliana and species in the Asteraceae reveal a complex network of small syntenic segments and major chromosomal rearrangements.

Authors:  Lee Timms; Rosmery Jimenez; Mike Chase; Dean Lavelle; Leah McHale; Alexander Kozik; Zhao Lai; Adam Heesacker; Steven Knapp; Loren Rieseberg; Richard Michelmore; Rick Kesseli
Journal:  Genetics       Date:  2006-06-18       Impact factor: 4.562

6.  DNA variation at the invertase locus invGE/GF is associated with tuber quality traits in populations of potato breeding clones.

Authors:  Li Li; Josef Strahwald; Hans-Reinhard Hofferbert; Jens Lübeck; Eckart Tacke; Holger Junghans; Jörg Wunder; Christiane Gebhardt
Journal:  Genetics       Date:  2005-03-31       Impact factor: 4.562

7.  Construction of a watermelon BAC library and identification of SSRs anchored to melon or Arabidopsis genomes.

Authors:  T Joobeur; G Gusmini; X Zhang; A Levi; Y Xu; T C Wehner; M Oliver; R A Dean
Journal:  Theor Appl Genet       Date:  2006-04-08       Impact factor: 5.699

8.  An EST resource for cassava and other species of Euphorbiaceae.

Authors:  James V Anderson; Michel Delseny; Martin A Fregene; Veronique Jorge; Chikelu Mba; Camilo Lopez; Silvia Restrepo; Mauricio Soto; Benoit Piegu; Valerie Verdier; Richard Cooke; Joe Tohme; David P Horvath
Journal:  Plant Mol Biol       Date:  2004-11       Impact factor: 4.076

9.  Rewatering plants after a long water-deficit treatment reveals that leaf epidermal cells retain their ability to expand after the leaf has apparently reached its final size.

Authors:  Leandra Lechner; Gustavo A Pereyra-Irujo; Christine Granier; Luis A N Aguirrezábal
Journal:  Ann Bot       Date:  2008-03-13       Impact factor: 4.357

10.  SSRs and INDELs mined from the sunflower EST database: abundance, polymorphisms, and cross-taxa utility.

Authors:  Adam Heesacker; Venkata K Kishore; Wenxiang Gao; Shunxue Tang; Judith M Kolkman; Alan Gingle; Marta Matvienko; Alexander Kozik; Richard M Michelmore; Zhao Lai; Loren H Rieseberg; Steven J Knapp
Journal:  Theor Appl Genet       Date:  2008-07-17       Impact factor: 5.699

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.