Literature DB >> 17147402

Resolution of chiral phosphate, phosphonate, and phosphinate esters by an enantioselective enzyme library.

Charity Nowlan1, Yingchun Li, Johannes C Hermann, Timothy Evans, Joseph Carpenter, Eman Ghanem, Brian K Shoichet, Frank M Raushel.   

Abstract

An array of 16 enantiomeric pairs of chiral phosphate, phosphonate, and phosphinate esters was used to establish the breadth of the stereoselective discrimination inherent within the bacterial phosphotriesterase and 15 mutant enzymes. For each substrate, the leaving group was 4-hydroxyacetophenone while the other two groups attached to the phosphorus core consisted of an asymmetric mixture of methyl, methoxy, ethyl, ethoxy, isopropoxy, phenyl, phenoxy, cyclohexyl, and cyclohexoxy substituents. For the wild-type enzyme, the relative rates of hydrolysis for the two enantiomers ranged from 3 to 5.4 x 10(5). Various combinations of site-specific mutations within the active site were used to create modified enzymes with alterations in their enantioselective properties. For the single-site mutant enzyme, G60A, the stereoselectivity is enhanced relative to that of the wild-type enzyme by 1-3 orders of magnitude. Additional mutants were obtained where the stereoselectivity is inverted relative to the wild-type enzyme for 13 of the 16 pairs of enantiomers tested for this investigation. The most dramatic example was obtained for the hydrolysis of 4-acetylphenyl methyl phenyl phosphate. The G60A mutant preferentially hydrolyzes the SP-enantiomer by a factor of 3.7 x 10(5). The I106G/F132G/H257Y mutant preferentially hydrolyzes the RP-enantiomer by a factor of 9.7 x 10(2). This represents an enantioselective discrimination of 3.6 x 10(8) between these two mutants, with a total of only four amino acid changes. The rate differential between the two enantiomers for any given mutant enzyme is postulated to be governed by the degree of nonproductive binding within the enzyme active site and stabilization of the transition state. This hypothesis is supported by computational docking of the high-energy, pentavalent form of the substrates to modeled structures of the mutant enzyme; the energies of the docked transition-state analogues qualitatively capture the enantiomeric preferences of the various mutants for the different substrates. These results demonstrate that the catalytic properties of the wild-type phosphotriesterase can be exploited for the kinetic resolution of a wide range of phosphate, phosphonate, and phosphinate esters and that the active site of this enzyme is remarkably amenable to structural perturbations via amino acid substitution.

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Year:  2006        PMID: 17147402     DOI: 10.1021/ja0658618

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  12 in total

1.  Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents.

Authors:  Ping-Chuan Tsai; Nicholas Fox; Andrew N Bigley; Steven P Harvey; David P Barondeau; Frank M Raushel
Journal:  Biochemistry       Date:  2012-07-31       Impact factor: 3.162

2.  Molecular engineering of organophosphate hydrolysis activity from a weak promiscuous lactonase template.

Authors:  Monika M Meier; Chitra Rajendran; Christoph Malisi; Nicholas G Fox; Chengfu Xu; Sandra Schlee; David P Barondeau; Birte Höcker; Reinhard Sterner; Frank M Raushel
Journal:  J Am Chem Soc       Date:  2013-07-29       Impact factor: 15.419

3.  Stereoselective hydrolysis of organophosphate nerve agents by the bacterial phosphotriesterase.

Authors:  Ping-Chuan Tsai; Andrew Bigley; Yingchun Li; Eman Ghanem; C Linn Cadieux; Shane A Kasten; Tony E Reeves; Douglas M Cerasoli; Frank M Raushel
Journal:  Biochemistry       Date:  2010-09-21       Impact factor: 3.162

4.  Structure, mechanism, and substrate profile for Sco3058: the closest bacterial homologue to human renal dipeptidase .

Authors:  Jennifer A Cummings; Tinh T Nguyen; Alexander A Fedorov; Peter Kolb; Chengfu Xu; Elena V Fedorov; Brian K Shoichet; David P Barondeau; Steven C Almo; Frank M Raushel
Journal:  Biochemistry       Date:  2010-01-26       Impact factor: 3.162

5.  Target selection and annotation for the structural genomics of the amidohydrolase and enolase superfamilies.

Authors:  Ursula Pieper; Ranyee Chiang; Jennifer J Seffernick; Shoshana D Brown; Margaret E Glasner; Libusha Kelly; Narayanan Eswar; J Michael Sauder; Jeffrey B Bonanno; Subramanyam Swaminathan; Stephen K Burley; Xiaojing Zheng; Mark R Chance; Steven C Almo; John A Gerlt; Frank M Raushel; Matthew P Jacobson; Patricia C Babbitt; Andrej Sali
Journal:  J Struct Funct Genomics       Date:  2009-02-14

6.  Rational redesign of the 4-chlorobenzoate binding site of 4-chlorobenzoate: coenzyme a ligase for expanded substrate range.

Authors:  Rui Wu; Albert S Reger; Jian Cao; Andrew M Gulick; Debra Dunaway-Mariano
Journal:  Biochemistry       Date:  2007-11-21       Impact factor: 3.162

7.  Differentiation of chiral phosphorus enantiomers by P and H NMR spectroscopy using amino acid derivatives as chemical solvating agents.

Authors:  Yingchun Li; Frank M Raushel
Journal:  Tetrahedron Asymmetry       Date:  2007-07-04

Review 8.  Catalytic mechanisms for phosphotriesterases.

Authors:  Andrew N Bigley; Frank M Raushel
Journal:  Biochim Biophys Acta       Date:  2012-04-26

9.  Enzyme-Catalyzed Kinetic Resolution of Chiral Precursors to Antiviral Prodrugs.

Authors:  Dao Feng Xiang; Andrew N Bigley; Emily Desormeaux; Tamari Narindoshvili; Frank M Raushel
Journal:  Biochemistry       Date:  2019-07-10       Impact factor: 3.162

10.  Structure-based activity prediction for an enzyme of unknown function.

Authors:  Johannes C Hermann; Ricardo Marti-Arbona; Alexander A Fedorov; Elena Fedorov; Steven C Almo; Brian K Shoichet; Frank M Raushel
Journal:  Nature       Date:  2007-07-01       Impact factor: 49.962

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