Literature DB >> 17142881

RNAi in embryonic stem cells.

Li Ding1, Frank Buchholz.   

Abstract

Embryonic stem (ES) cells are pluripotent cells that can be isolated and grown in vitro from the inner cell mass of blastocysts. Their potential to differentiate into any cell of the body makes them a promising starting material for cell therapy. Much progress has been made in recent years to develop ES cell differentiation protocols employing cocktails of certain growth factors or by using cell-type-restricted promoters driving the expression of selection markers or fluorescent proteins. However, little is known about the molecular details underlying the earliest processes of mammalian development. Genetic tools that provide novel insight into these processes would be very helpful to gain a better molecular understanding and to design better differentiation protocols. Recently, RNAi has emerged as a powerful technology to perform loss-of-function studies in mammalian cells. This technology should be ideal to identify and study genes required for ES cell self-renewal and differentiation. Here, we review the recent advances and challenges of RNAi research in ES cells and we provide a perspective on possible applications to enhance our understanding of ES cell self-renewal and early differentiation.

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Year:  2006        PMID: 17142881     DOI: 10.1007/s12015-006-0003-1

Source DB:  PubMed          Journal:  Stem Cell Rev        ISSN: 1550-8943            Impact factor:   5.739


  101 in total

Review 1.  RNA interference: gene silencing in the fast lane.

Authors:  Ralf Kittler; Frank Buchholz
Journal:  Semin Cancer Biol       Date:  2003-08       Impact factor: 15.707

2.  A microRNA array reveals extensive regulation of microRNAs during brain development.

Authors:  Anna M Krichevsky; Kevin S King; Christine P Donahue; Konstantin Khrapko; Kenneth S Kosik
Journal:  RNA       Date:  2003-10       Impact factor: 4.942

3.  siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference.

Authors:  Yuki Naito; Tomoyuki Yamada; Kumiko Ui-Tei; Shinichi Morishita; Kaoru Saigo
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

Review 4.  Self-renewal vs. differentiation of mouse embryonic stem cells.

Authors:  K Sue O'Shea
Journal:  Biol Reprod       Date:  2004-08-25       Impact factor: 4.285

5.  Noise amidst the silence: off-target effects of siRNAs?

Authors:  Aimee L Jackson; Peter S Linsley
Journal:  Trends Genet       Date:  2004-11       Impact factor: 11.639

6.  Induction of an interferon response by RNAi vectors in mammalian cells.

Authors:  Alan J Bridge; Stephanie Pebernard; Annick Ducraux; Anne-Laure Nicoulaz; Richard Iggo
Journal:  Nat Genet       Date:  2003-07       Impact factor: 38.330

7.  Inhibition of pluripotential embryonic stem cell differentiation by purified polypeptides.

Authors:  A G Smith; J K Heath; D D Donaldson; G G Wong; J Moreau; M Stahl; D Rogers
Journal:  Nature       Date:  1988-12-15       Impact factor: 49.962

8.  Successful inactivation of endogenous Oct-3/4 and c-mos genes in mouse preimplantation embryos and oocytes using short interfering RNAs.

Authors:  Mi-Hyun Kim; Xunmei Yuan; Sayaka Okumura; Fuyuki Ishikawa
Journal:  Biochem Biophys Res Commun       Date:  2002-09-06       Impact factor: 3.575

Review 9.  Functional genomic approaches using the nematode Caenorhabditis elegans as a model system.

Authors:  Junho Lee; Seunghee Nam; Soon Baek Hwang; Mingi Hong; Jae Young Kwon; Kyu Sang Joeng; Seol Hee Im; Jiwon Shim; Moon Cheol Park
Journal:  J Biochem Mol Biol       Date:  2004-01-31

10.  Pax-6, a murine paired box gene, is expressed in the developing CNS.

Authors:  C Walther; P Gruss
Journal:  Development       Date:  1991-12       Impact factor: 6.868

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  4 in total

1.  Oct4 links multiple epigenetic pathways to the pluripotency network.

Authors:  Junjun Ding; Huilei Xu; Francesco Faiola; Avi Ma'ayan; Jianlong Wang
Journal:  Cell Res       Date:  2011-11-15       Impact factor: 25.617

Review 2.  From RNAi screens to molecular function in embryonic stem cells.

Authors:  Li Ding; Ina Poser; Maciej Paszkowski-Rogacz; Frank Buchholz
Journal:  Stem Cell Rev Rep       Date:  2012-03       Impact factor: 5.739

3.  Nanotopography-mediated reverse uptake for siRNA delivery into neural stem cells to enhance neuronal differentiation.

Authors:  Aniruddh Solanki; Shreyas Shah; Perry T Yin; Ki-Bum Lee
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

4.  Identification of RSK and TTK as Modulators of Blood Vessel Morphogenesis Using an Embryonic Stem Cell-Based Vascular Differentiation Assay.

Authors:  Lamis Hammoud; Jessica R Adams; Amanda J Loch; Richard C Marcellus; David E Uehling; Ahmed Aman; Christopher Fladd; Trevor D McKee; Christine E B Jo; Rima Al-Awar; Sean E Egan; Janet Rossant
Journal:  Stem Cell Reports       Date:  2016-09-08       Impact factor: 7.765

  4 in total

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