Literature DB >> 17137790

Spatial genome organization in the formation of chromosomal translocations.

Karen J Meaburn1, Tom Misteli, Evi Soutoglou.   

Abstract

Chromosomal translocations and genomic instability are universal hallmarks of tumor cells. While the molecular mechanisms leading to the formation of translocations are rapidly being elucidated, a cell biological understanding of how chromosomes undergo translocations in the context of the cell nucleus in vivo is largely lacking. The recent realization that genomes are non-randomly arranged within the nuclear space has profound consequences for mechanisms of chromosome translocations. We review here the emerging principles of spatial genome organization and discuss the implications of non-random spatial genome organization for the genesis and specificity of cancerous chromosomal translocations.

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Year:  2006        PMID: 17137790      PMCID: PMC1805052          DOI: 10.1016/j.semcancer.2006.10.008

Source DB:  PubMed          Journal:  Semin Cancer Biol        ISSN: 1044-579X            Impact factor:   15.707


  130 in total

1.  Nuclear structure and gene activity in human differentiated cells.

Authors:  Eva Bártová; Stanislav Kozubek; Pavla Jirsová; Michal Kozubek; Hana Gajová; Emilie Lukásová; Magdalena Skalníková; Alena Ganová; Irena Koutná; Michael Hausmann
Journal:  J Struct Biol       Date:  2002-08       Impact factor: 2.867

2.  Chromosomes are predominantly located randomly with respect to each other in interphase human cells.

Authors:  Michael N Cornforth; Karin M Greulich-Bode; Bradford D Loucas; Javier Arsuaga; Mariel Vázquez; Rainer K Sachs; Martina Brückner; Michael Molls; Philip Hahnfeldt; Lynn Hlatky; David J Brenner
Journal:  J Cell Biol       Date:  2002-10-28       Impact factor: 10.539

3.  Influences of chromosome size, gene density and nuclear position on the frequency of constitutional translocations in the human population.

Authors:  Wendy A Bickmore; Peter Teague
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

4.  Spatial proximity of translocation-prone gene loci in human lymphomas.

Authors:  Jeffrey J Roix; Philip G McQueen; Peter J Munson; Luis A Parada; Tom Misteli
Journal:  Nat Genet       Date:  2003-07       Impact factor: 38.330

5.  An uncertainty principle in chromosome positioning.

Authors:  Luis A Parada; Jeffrey J Roix; Tom Misteli
Journal:  Trends Cell Biol       Date:  2003-08       Impact factor: 20.808

6.  The pig genome: compositional analysis and identification of the gene-richest regions in chromosomes and nuclei.

Authors:  Concetta Federico; Salvatore Saccone; Letizia Andreozzi; Salvatore Motta; Vincenzo Russo; Nicolas Carels; Giorgio Bernardi
Journal:  Gene       Date:  2004-12-22       Impact factor: 3.688

7.  Chromosome order in HeLa cells changes during mitosis and early G1, but is stably maintained during subsequent interphase stages.

Authors:  Joachim Walter; Lothar Schermelleh; Marion Cremer; Satoshi Tashiro; Thomas Cremer
Journal:  J Cell Biol       Date:  2003-02-25       Impact factor: 10.539

8.  Colocalization of multiple DNA double-strand breaks at a single Rad52 repair centre.

Authors:  Michael Lisby; Uffe H Mortensen; Rodney Rothstein
Journal:  Nat Cell Biol       Date:  2003-06       Impact factor: 28.824

9.  Arrangement of chromosome 11 and 22 territories, EWSR1 and FLI1 genes, and other genetic elements of these chromosomes in human lymphocytes and Ewing sarcoma cells.

Authors:  Renata Taslerová; Stanislav Kozubek; Emilie Lukásová; Pavla Jirsová; Eva Bártová; Michal Kozubek
Journal:  Hum Genet       Date:  2002-11-16       Impact factor: 4.132

10.  Gene density and transcription influence the localization of chromatin outside of chromosome territories detectable by FISH.

Authors:  Nicola L Mahy; Paul E Perry; Wendy A Bickmore
Journal:  J Cell Biol       Date:  2002-12-09       Impact factor: 10.539

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  83 in total

1.  CBFB and MYH11 in inv(16)(p13q22) of acute myeloid leukemia displaying close spatial proximity in interphase nuclei of human hematopoietic stem cells.

Authors:  Allison B Weckerle; Madhumita Santra; Maggie C Y Ng; Patrick P Koty; Yuh-Hwa Wang
Journal:  Genes Chromosomes Cancer       Date:  2011-06-02       Impact factor: 5.006

2.  Modeling of chromosome intermingling by partially overlapping uniform random polygons.

Authors:  T Blackstone; R Scharein; B Borgo; R Varela; Y Diao; J Arsuaga
Journal:  J Math Biol       Date:  2010-04-09       Impact factor: 2.259

Review 3.  Higher-order genome organization in human disease.

Authors:  Tom Misteli
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-30       Impact factor: 10.005

Review 4.  DNA damage response.

Authors:  Giuseppina Giglia-Mari; Angelika Zotter; Wim Vermeulen
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-01-01       Impact factor: 10.005

Review 5.  The role of mechanistic factors in promoting chromosomal translocations found in lymphoid and other cancers.

Authors:  Yu Zhang; Monica Gostissa; Dominic G Hildebrand; Michael S Becker; Cristian Boboila; Roberto Chiarle; Susanna Lewis; Frederick W Alt
Journal:  Adv Immunol       Date:  2010       Impact factor: 3.543

6.  Identification of Gene Positioning Factors Using High-Throughput Imaging Mapping.

Authors:  Sigal Shachar; Ty C Voss; Gianluca Pegoraro; Nicholas Sciascia; Tom Misteli
Journal:  Cell       Date:  2015-08-13       Impact factor: 41.582

7.  c-Myc-dependent formation of Robertsonian translocation chromosomes in mouse cells.

Authors:  Amanda Guffei; Zelda Lichtensztejn; Amanda Gonçalves Dos Santos Silva; Sherif F Louis; Andrea Caporali; Sabine Mai
Journal:  Neoplasia       Date:  2007-07       Impact factor: 5.715

Review 8.  DNA replication timing, genome stability and cancer: late and/or delayed DNA replication timing is associated with increased genomic instability.

Authors:  Nathan Donley; Mathew J Thayer
Journal:  Semin Cancer Biol       Date:  2013-01-14       Impact factor: 15.707

9.  Protein-mediated chromosome pairing of repetitive arrays.

Authors:  Ekaterina V Mirkin; Frederick S Chang; Nancy Kleckner
Journal:  J Mol Biol       Date:  2013-11-08       Impact factor: 5.469

Review 10.  The cellular etiology of chromosome translocations.

Authors:  Vassilis Roukos; Bharat Burman; Tom Misteli
Journal:  Curr Opin Cell Biol       Date:  2013-03-14       Impact factor: 8.382

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