Literature DB >> 17134819

Thermal denaturations of staphylococcal nuclease wild-type and mutants monitored by fluorescence and circular dichroism are similar: lack of evidence for other than a two state thermal denaturation.

Michael P Byrne1, Wesley E Stites.   

Abstract

It is unclear whether the thermal denaturation of staphylococcal nuclease is a two state, three state, or variable two state process. The thermal denaturation of wild-type staphylococcal nuclease was followed by tryptophan fluorescence and circular dichroism signal at 222 nm, forty-two and fourteen times, respectively. Analysis of this data using a simple two state model gave melting temperatures of 53.0+/-0.4 degrees C (fluorescence) and 52.7+/-0.6 degrees C (CD) and van't Hoff enthalpies of 82.4+/-2.6 kcal/mol and 88.6+/-4.2 kcal/mol. Ninety-seven mutants also had these parameters determined by both fluorescence and CD. The average difference between the melting temperatures was 1.05+/-0.75 degrees and the average difference between van't Hoff enthalpies was 1.6+/-4.8 kcal/mol. These very similar results for the two spectroscopic probes of structure are discussed in the context of the different models that have been proposed for nuclease denaturation. It is concluded, for most nuclease variants, that the errors introduced by a two state assumption are negligible and either virtually all helical structure is lost in any initial unfolding event or any intermediate must have low stability.

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Year:  2006        PMID: 17134819      PMCID: PMC1941688          DOI: 10.1016/j.bpc.2006.10.014

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  33 in total

1.  Ensemble modulation as an origin of denaturant-independent hydrogen exchange in proteins.

Authors:  J O Wooll; J O Wrabl; V J Hilser
Journal:  J Mol Biol       Date:  2000-08-11       Impact factor: 5.469

2.  Early formation of a beta hairpin during folding of staphylococcal nuclease H124L as detected by pulsed hydrogen exchange.

Authors:  William F Walkenhorst; Jason A Edwards; John L Markley; Heinrich Roder
Journal:  Protein Sci       Date:  2002-01       Impact factor: 6.725

3.  Probing the conformational state of a truncated staphylococcal nuclease R using time of flight mass spectrometry with limited proteolysis.

Authors:  F Yang; Y Cheng; J Peng; J Zhou; G Jing
Journal:  Eur J Biochem       Date:  2001-08

4.  Probing the subtle conformational state of N138ND2-Q106O hydrogen bonding deletion mutant (Asn138Asp) of staphylococcal nuclease using time of flight mass spectrometry with limited proteolysis.

Authors:  Sun Huang; Xiajuan Zou; Peng Guo; Lijun Zhong; Jiarou Peng; Guozhong Jing
Journal:  Arch Biochem Biophys       Date:  2005-02-01       Impact factor: 4.013

5.  Thermodynamics of denaturant-induced unfolding of a protein that exhibits variable two-state denaturation.

Authors:  Allan Chris M Ferreon; D W Bolen
Journal:  Biochemistry       Date:  2004-10-26       Impact factor: 3.162

6.  Hydrogen exchange in unligated and ligated staphylococcal nuclease.

Authors:  S N Loh; K E Prehoda; J Wang; J L Markley
Journal:  Biochemistry       Date:  1993-10-19       Impact factor: 3.162

Review 7.  Denatured states of proteins.

Authors:  K A Dill; D Shortle
Journal:  Annu Rev Biochem       Date:  1991       Impact factor: 23.643

8.  The phase transition between a compact denatured state and a random coil state in staphylococcal nuclease is first-order.

Authors:  A G Gittis; W E Stites; E E Lattman
Journal:  J Mol Biol       Date:  1993-08-05       Impact factor: 5.469

9.  Perchlorate-induced conformational transition of Staphylococcal nuclease: evidence for an equilibrium unfolding intermediate.

Authors:  Haripada Maity; Maurice R Eftink
Journal:  Arch Biochem Biophys       Date:  2004-11-01       Impact factor: 4.013

10.  Early events during folding of wild-type staphylococcal nuclease and a single-tryptophan variant studied by ultrarapid mixing.

Authors:  Kosuke Maki; Hong Cheng; Dimitry A Dolgikh; M C Ramachandra Shastry; Heinrich Roder
Journal:  J Mol Biol       Date:  2004-04-23       Impact factor: 5.469

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  5 in total

1.  Refinement of noncalorimetric determination of the change in heat capacity, DeltaC(p), of protein unfolding and validation across a wide temperature range.

Authors:  Deepika Talla-Singh; Wesley E Stites
Journal:  Proteins       Date:  2008-06

2.  Comparison of Two ESI MS Based H/D Exchange Methods for Extracting Protein Folding Energies.

Authors:  Rohana Liyanage; Nagarjuna Devarapalli; Latisha M Puckett; N H Phan; Jennifer Gidden; Wesley E Stites; Jackson O Lay
Journal:  Int J Mass Spectrom       Date:  2009-10-15       Impact factor: 1.986

3.  The fluorescence detected guanidine hydrochloride equilibrium denaturation of wild-type staphylococcal nuclease does not fit a three-state unfolding model.

Authors:  Deepika Talla; Wesley E Stites
Journal:  Biochimie       Date:  2013-03-19       Impact factor: 4.079

4.  The pH dependence of staphylococcal nuclease stability is incompatible with a three-state denaturation model.

Authors:  Daniel Spencer; García-Moreno E Bertrand; Wesley E Stites
Journal:  Biophys Chem       Date:  2013-07-01       Impact factor: 2.352

5.  Conformational Consequences for Compatible Osmolytes on Thermal Denaturation.

Authors:  Nimesh Shukla; Brianna Bembenek; Erika A Taylor; Christina M Othon
Journal:  Life (Basel)       Date:  2021-12-13
  5 in total

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