Literature DB >> 17128963

Calmodulin, conformational states, and calcium signaling. A single-molecule perspective.

Carey K Johnson1.   

Abstract

Single-molecule fluorescence measurements can provide a new perspective on the conformations, dynamics, and interactions of proteins. Recent examples are described illustrating the application of single-molecule fluorescence spectroscopy to calcium signaling proteins with an emphasis on the new information available in single-molecule fluorescence burst measurements, resonance energy transfer, and polarization modulation methods. Calcium signaling pathways are crucial in many cellular processes. The calcium binding protein calmodulin (CaM) serves as a molecular switch to regulate a network of calcium signaling pathways. Single-molecule spectroscopic methods can yield insights into conformations and dynamics of CaM and CaM-regulated proteins. Examples include studies of the conformations and dynamics of CaM, binding of target peptides, and interaction with the plasma-membrane Ca2+ pump. Single-molecule resonance energy transfer measurements revealed conformational substates of CaM, and single-molecule polarization modulation spectroscopy was used to probe interactions between CaM and the plasma-membrane Ca2+-ATPase.

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Year:  2006        PMID: 17128963      PMCID: PMC2533622          DOI: 10.1021/bi061058e

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  107 in total

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Review 4.  Structural dynamics and processing of nucleic acids revealed by single-molecule spectroscopy.

Authors:  Taekjip Ha
Journal:  Biochemistry       Date:  2004-04-13       Impact factor: 3.162

5.  Lumenal gating mechanism revealed in calcium pump crystal structures with phosphate analogues.

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Journal:  Nature       Date:  2004-09-26       Impact factor: 49.962

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Authors:  Klaus P Hoeflich; Mitsuhiko Ikura
Journal:  Cell       Date:  2002-03-22       Impact factor: 41.582

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  22 in total

1.  Analysis and elimination of a bias in targeted molecular dynamics simulations of conformational transitions: application to calmodulin.

Authors:  Victor Ovchinnikov; Martin Karplus
Journal:  J Phys Chem B       Date:  2012-03-28       Impact factor: 2.991

2.  Entropic mechanism of large fluctuation in allosteric transition.

Authors:  Kazuhito Itoh; Masaki Sasai
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-12       Impact factor: 11.205

3.  A distribution-based method to resolve single-molecule Förster resonance energy transfer observations.

Authors:  Mihailo Backović; E Shane Price; Carey K Johnson; John P Ralston
Journal:  J Chem Phys       Date:  2011-04-14       Impact factor: 3.488

4.  Soluble calcium-binding proteins (SCBPs) of the earthworm Lumbricus terrestris: possible role as relaxation factors in muscle.

Authors:  Prasath Thiruketheeswaran; Ralf Huch; Jochen D'Haese
Journal:  J Comp Physiol B       Date:  2018-07-28       Impact factor: 2.200

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Authors:  Asma Zaidi
Journal:  World J Biol Chem       Date:  2010-09-26

6.  Distribution patterns of calcium-binding proteins in pancreatic tissue of non-diabetic as well as type 2 diabetic rats and in rat insulinoma beta-cells (INS-1).

Authors:  Ivonne Bazwinsky-Wutschke; Sabine Wolgast; Eckhard Mühlbauer; Elmar Peschke
Journal:  Histochem Cell Biol       Date:  2010-07-07       Impact factor: 4.304

Review 7.  Sending signals dynamically.

Authors:  Robert G Smock; Lila M Gierasch
Journal:  Science       Date:  2009-04-10       Impact factor: 47.728

8.  Resolved Structural States of Calmodulin in Regulation of Skeletal Muscle Calcium Release.

Authors:  Megan R McCarthy; Yahor Savich; Razvan L Cornea; David D Thomas
Journal:  Biophys J       Date:  2020-01-21       Impact factor: 4.033

9.  Single-Molecule FRET States, Conformational Interchange, and Conformational Selection by Dye Labels in Calmodulin.

Authors:  Matthew S DeVore; Adebayo Braimah; David R Benson; Carey K Johnson
Journal:  J Phys Chem B       Date:  2016-05-04       Impact factor: 2.991

10.  Single molecule analyses of the conformational substates of calmodulin bound to the phosphorylase kinase complex.

Authors:  Timothy S Priddy; E Shane Price; Carey K Johnson; Gerald M Carlson
Journal:  Protein Sci       Date:  2007-06       Impact factor: 6.725

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