Literature DB >> 17123955

Conversion of pre-RISC to holo-RISC by Ago2 during assembly of RNAi complexes.

Kevin Kim1, Young Sik Lee, Richard W Carthew.   

Abstract

In the Drosophila RNA interference (RNAi) pathway, small interfering RNAs (siRNAs) direct Argonaute2 (Ago2), an endonuclease, within the RNA-induced silencing complex (RISC) to cleave complementary mRNA targets. In vitro studies have shown that, for each siRNA duplex, RISC retains only one strand, the guide, and releases the other, the passenger, to form a holo-RISC complex. Here, we have isolated a new Ago2 mutant allele and provide, for the first time, in vivo evidence that endogenous Ago2 slicer activity is important to mount an RNAi response in Drosophila. We demonstrate in vivo that efficient removal of the passenger strand from RISC requires the cleavage activity of Ago2. We have also identified a new intermediate complex in the RISC assembly pathway, pre-RISC, in which Ago2 is stably bound to double-stranded siRNA.

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Year:  2006        PMID: 17123955      PMCID: PMC1705758          DOI: 10.1261/rna.283207

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  22 in total

1.  Crystal structure of Argonaute and its implications for RISC slicer activity.

Authors:  Ji-Joon Song; Stephanie K Smith; Gregory J Hannon; Leemor Joshua-Tor
Journal:  Science       Date:  2004-07-29       Impact factor: 47.728

2.  Argonaute2 is the catalytic engine of mammalian RNAi.

Authors:  Jidong Liu; Michelle A Carmell; Fabiola V Rivas; Carolyn G Marsden; J Michael Thomson; Ji-Joon Song; Scott M Hammond; Leemor Joshua-Tor; Gregory J Hannon
Journal:  Science       Date:  2004-07-29       Impact factor: 47.728

3.  Cleavage of the siRNA passenger strand during RISC assembly in human cells.

Authors:  Philipp J F Leuschner; Stefan L Ameres; Stephanie Kueng; Javier Martinez
Journal:  EMBO Rep       Date:  2006-01-20       Impact factor: 8.807

4.  R2D2, a bridge between the initiation and effector steps of the Drosophila RNAi pathway.

Authors:  Qinghua Liu; Tim A Rand; Savitha Kalidas; Fenghe Du; Hyun-Eui Kim; Dean P Smith; Xiaodong Wang
Journal:  Science       Date:  2003-09-26       Impact factor: 47.728

5.  Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways.

Authors:  Katsutomo Okamura; Akira Ishizuka; Haruhiko Siomi; Mikiko C Siomi
Journal:  Genes Dev       Date:  2004-07-01       Impact factor: 11.361

6.  A Dicer-2-dependent 80s complex cleaves targeted mRNAs during RNAi in Drosophila.

Authors:  John W Pham; Janice L Pellino; Young Sik Lee; Richard W Carthew; Erik J Sontheimer
Journal:  Cell       Date:  2004-04-02       Impact factor: 41.582

7.  Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways.

Authors:  Young Sik Lee; Kenji Nakahara; John W Pham; Kevin Kim; Zhengying He; Erik J Sontheimer; Richard W Carthew
Journal:  Cell       Date:  2004-04-02       Impact factor: 41.582

8.  Making a better RNAi vector for Drosophila: use of intron spacers.

Authors:  Young Sik Lee; Richard W Carthew
Journal:  Methods       Date:  2003-08       Impact factor: 3.608

9.  RISC assembly defects in the Drosophila RNAi mutant armitage.

Authors:  Yukihide Tomari; Tingting Du; Benjamin Haley; Dianne S Schwarz; Ryan Bennett; Heather A Cook; Birgit S Koppetsch; William E Theurkauf; Phillip D Zamore
Journal:  Cell       Date:  2004-03-19       Impact factor: 41.582

10.  Analysis of Drosophila photoreceptor axon guidance in eye-specific mosaics.

Authors:  T P Newsome; B Asling; B J Dickson
Journal:  Development       Date:  2000-02       Impact factor: 6.868

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  46 in total

Review 1.  Post-transcriptional gene silencing, transcriptional gene silencing and human immunodeficiency virus.

Authors:  Catalina Méndez; Chantelle L Ahlenstiel; Anthony D Kelleher
Journal:  World J Virol       Date:  2015-08-12

2.  QIP, a putative exonuclease, interacts with the Neurospora Argonaute protein and facilitates conversion of duplex siRNA into single strands.

Authors:  Mekhala Maiti; Heng-Chi Lee; Yi Liu
Journal:  Genes Dev       Date:  2007-02-20       Impact factor: 11.361

3.  RDE-1 slicer activity is required only for passenger-strand cleavage during RNAi in Caenorhabditis elegans.

Authors:  Florian A Steiner; Kristy L Okihara; Suzanne W Hoogstrate; Titia Sijen; René F Ketting
Journal:  Nat Struct Mol Biol       Date:  2009-01-18       Impact factor: 15.369

4.  Proteomics identification of Drosophila small interfering RNA-associated factors.

Authors:  Vincent R Gerbasi; Daniel E Golden; Sara B Hurtado; Erik J Sontheimer
Journal:  Mol Cell Proteomics       Date:  2010-05-15       Impact factor: 5.911

5.  Homology directed repair is unaffected by the absence of siRNAs in Drosophila melanogaster.

Authors:  Ines Schmidts; Romy Böttcher; Milijana Mirkovic-Hösle; Klaus Förstemann
Journal:  Nucleic Acids Res       Date:  2016-06-27       Impact factor: 16.971

6.  Disentangling the aging gene expression network of termite queens.

Authors:  José Manuel Monroy Kuhn; Karen Meusemann; Judith Korb
Journal:  BMC Genomics       Date:  2021-05-11       Impact factor: 3.969

Review 7.  Origins and Mechanisms of miRNAs and siRNAs.

Authors:  Richard W Carthew; Erik J Sontheimer
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

8.  Gene silencing mechanisms mediated by Aubergine piRNA complexes in Drosophila male gonad.

Authors:  Kazumichi M Nishida; Kuniaki Saito; Tomoko Mori; Yoshinori Kawamura; Tomoko Nagami-Okada; Sachi Inagaki; Haruhiko Siomi; Mikiko C Siomi
Journal:  RNA       Date:  2007-09-13       Impact factor: 4.942

9.  Requirement for CRIF1 in RNA interference and Dicer-2 stability.

Authors:  Su Jun Lim; Anthony Scott; Xiao-Peng Xiong; Shabnam Vahidpour; John Karijolich; Dongdong Guo; Shanshan Pei; Yi-Tao Yu; Rui Zhou; Willis X Li
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

10.  Multiple sensors ensure guide strand selection in human RNAi pathways.

Authors:  Cameron L Noland; Jennifer A Doudna
Journal:  RNA       Date:  2013-03-26       Impact factor: 4.942

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