Literature DB >> 15231716

Distinct roles for Argonaute proteins in small RNA-directed RNA cleavage pathways.

Katsutomo Okamura1, Akira Ishizuka, Haruhiko Siomi, Mikiko C Siomi.   

Abstract

In mammalian cells, both microRNAs (miRNAs) and small interfering RNAs (siRNAs) are thought to be loaded into the same RNA-induced silencing complex (RISC), where they guide mRNA degradation or translation silencing depending on the complementarity of the target. In Drosophila, Argonaute2 (AGO2) was identified as part of the RISC complex. Here we show that AGO2 is an essential component for siRNA-directed RNA interference (RNAi) response and is required for the unwinding of siRNA duplex and in consequence assembly of siRNA into RISC in Drosophila embryos. However, Drosophila embryos lacking AGO2, which are siRNA-directed RNAi-defective, are still capable of miRNA-directed target RNA cleavage. In contrast, Argonaute1 (AGO1), another Argonaute protein in fly, which is dispensable for siRNA-directed target RNA cleavage, is required for mature miRNA production that impacts on miRNA-directed RNA cleavage. The association of AGO1 with Dicer-1 and pre-miRNA also suggests that AGO1 is involved in miRNA biogenesis. Our findings show that distinct Argonaute proteins act at different steps of the small RNA silencing mechanism and suggest that there are inherent differences between siRNA-initiated RISCs and miRNA-initiated RISCs in Drosophila. Copyright 2004 Cold Spring Harbor Laboratory Press ISSN

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Year:  2004        PMID: 15231716      PMCID: PMC478188          DOI: 10.1101/gad.1210204

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  46 in total

1.  An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells.

Authors:  S M Hammond; E Bernstein; D Beach; G J Hannon
Journal:  Nature       Date:  2000-03-16       Impact factor: 49.962

2.  Targeted mRNA degradation by double-stranded RNA in vitro.

Authors:  T Tuschl; P D Zamore; R Lehmann; D P Bartel; P A Sharp
Journal:  Genes Dev       Date:  1999-12-15       Impact factor: 11.361

Review 3.  Post-transcriptional gene silencing across kingdoms.

Authors:  C Cogoni; G Macino
Journal:  Curr Opin Genet Dev       Date:  2000-12       Impact factor: 5.578

4.  The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans.

Authors:  B J Reinhart; F J Slack; M Basson; A E Pasquinelli; J C Bettinger; A E Rougvie; H R Horvitz; G Ruvkun
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

5.  Use of double-stranded RNA interference in Drosophila cell lines to dissect signal transduction pathways.

Authors:  J C Clemens; C A Worby; N Simonson-Leff; M Muda; T Maehama; B A Hemmings; J E Dixon
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

6.  Genetic requirements for inheritance of RNAi in C. elegans.

Authors:  A Grishok; H Tabara; C C Mello
Journal:  Science       Date:  2000-03-31       Impact factor: 47.728

7.  Role for a bidentate ribonuclease in the initiation step of RNA interference.

Authors:  E Bernstein; A A Caudy; S M Hammond; G J Hannon
Journal:  Nature       Date:  2001-01-18       Impact factor: 49.962

8.  Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing.

Authors:  A Grishok; A E Pasquinelli; D Conte; N Li; S Parrish; I Ha; D L Baillie; A Fire; G Ruvkun; C C Mello
Journal:  Cell       Date:  2001-07-13       Impact factor: 41.582

9.  Developmental roles and molecular characterization of a Drosophila homologue of Arabidopsis Argonaute1, the founder of a novel gene superfamily.

Authors:  Y Kataoka; M Takeichi; T Uemura
Journal:  Genes Cells       Date:  2001-04       Impact factor: 1.891

10.  Systematic gain-of-function genetics in Drosophila.

Authors:  P Rørth; K Szabo; A Bailey; T Laverty; J Rehm; G M Rubin; K Weigmann; M Milán; V Benes; W Ansorge; S M Cohen
Journal:  Development       Date:  1998-03       Impact factor: 6.868

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  347 in total

1.  Cucumber mosaic virus 2b protein inhibits RNA silencing pathways in green alga Chlamydomonas reinhardtii.

Authors:  Joon-Woo Ahn; Chun-Ji Yin; Jang Ryol Liu; Won-Joong Jeong
Journal:  Plant Cell Rep       Date:  2010-06-09       Impact factor: 4.570

2.  Tethering of human Ago proteins to mRNA mimics the miRNA-mediated repression of protein synthesis.

Authors:  Ramesh S Pillai; Caroline G Artus; Witold Filipowicz
Journal:  RNA       Date:  2004-08-30       Impact factor: 4.942

3.  Dicer is dispensable for asymmetric RISC loading in mammals.

Authors:  Juan G Betancur; Yukihide Tomari
Journal:  RNA       Date:  2011-11-21       Impact factor: 4.942

Review 4.  Regulation of small RNA stability: methylation and beyond.

Authors:  Lijuan Ji; Xuemei Chen
Journal:  Cell Res       Date:  2012-03-13       Impact factor: 25.617

5.  Identification, chromosomal mapping and conserved synteny of porcine Argonaute family of genes.

Authors:  Xiang Zhou; Heng Guo; Ke Chen; Hanhua Cheng; Rongjia Zhou
Journal:  Genetica       Date:  2010-05-09       Impact factor: 1.082

6.  Differential expression of microRNA species in human uterine leiomyoma versus normal myometrium.

Authors:  Erica E Marsh; Zhihong Lin; Ping Yin; Magdy Milad; Debabrata Chakravarti; Serdar E Bulun
Journal:  Fertil Steril       Date:  2007-09-04       Impact factor: 7.329

Review 7.  Small RNAs as guardians of the genome.

Authors:  Colin D Malone; Gregory J Hannon
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

8.  Genome-wide analysis of mRNAs regulated by Drosha and Argonaute proteins in Drosophila melanogaster.

Authors:  Jan Rehwinkel; Pavel Natalin; Alexander Stark; Julius Brennecke; Stephen M Cohen; Elisa Izaurralde
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

9.  Genome-wide analysis of mir-548 gene family reveals evolutionary and functional implications.

Authors:  Tingming Liang; Li Guo; Chang Liu
Journal:  J Biomed Biotechnol       Date:  2012-10-02

10.  Comparative analysis of RNAi screening technologies at genome-scale reveals an inherent processing inefficiency of the plasmid-based shRNA hairpin.

Authors:  Bhavneet Bhinder; David Shum; Hakim Djaballah
Journal:  Comb Chem High Throughput Screen       Date:  2014-02       Impact factor: 1.339

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