Literature DB >> 17122342

Cyclohexa-1,5-diene-1-carbonyl-coenzyme A (CoA) hydratases of Geobacter metallireducens and Syntrophus aciditrophicus: Evidence for a common benzoyl-CoA degradation pathway in facultative and strict anaerobes.

Franziska Peters1, Yoshifumi Shinoda, Michael J McInerney, Matthias Boll.   

Abstract

In the denitrifying bacterium Thauera aromatica, the central intermediate of anaerobic aromatic metabolism, benzoyl-coenzyme A (CoA), is dearomatized by the ATP-dependent benzoyl-CoA reductase to cyclohexa-1,5-diene-1-carbonyl-CoA (dienoyl-CoA). The dienoyl-CoA is further metabolized by a series of beta-oxidation-like reactions of the so-called benzoyl-CoA degradation pathway resulting in ring cleavage. Recently, evidence was obtained that obligately anaerobic bacteria that use aromatic growth substrates do not contain an ATP-dependent benzoyl-CoA reductase. In these bacteria, the reactions involved in dearomatization and cleavage of the aromatic ring have not been shown, so far. In this work, a characteristic enzymatic step of the benzoyl-CoA pathway in obligate anaerobes was demonstrated and characterized. Dienoyl-CoA hydratase activities were determined in extracts of Geobacter metallireducens (iron reducing), Syntrophus aciditrophicus (fermenting), and Desulfococcus multivorans (sulfate reducing) cells grown with benzoate. The benzoate-induced genes putatively coding for the dienoyl-CoA hydratases in the benzoate degraders G. metallireducens and S. aciditrophicus were heterologously expressed and characterized. Both gene products specifically catalyzed the reversible hydration of dienoyl-CoA to 6-hydroxycyclohexenoyl-CoA (Km, 80 and 35 microM; Vmax, 350 and 550 micromol min(-1) mg(-1), respectively). Neither enzyme had significant activity with cyclohex-1-ene-1-carbonyl-CoA or crotonyl-CoA. The results suggest that benzoyl-CoA degradation proceeds via dienoyl-CoA and 6-hydroxycyclohexanoyl-CoA in strictly anaerobic bacteria. The steps involved in dienoyl-CoA metabolism appear identical in all nonphotosynthetic anaerobic bacteria, although totally different benzene ring-dearomatizing enzymes are present in facultative and obligate anaerobes.

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Year:  2006        PMID: 17122342      PMCID: PMC1797300          DOI: 10.1128/JB.01467-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  26 in total

1.  Novel mode of microbial energy metabolism: organic carbon oxidation coupled to dissimilatory reduction of iron or manganese.

Authors:  D R Lovley; E J Phillips
Journal:  Appl Environ Microbiol       Date:  1988-06       Impact factor: 4.792

2.  Benzoyl-CoA reductase (dearomatizing), a key enzyme of anaerobic aromatic metabolism. A study of adenosinetriphosphatase activity, ATP stoichiometry of the reaction and EPR properties of the enzyme.

Authors:  M Boll; S S Albracht; G Fuchs
Journal:  Eur J Biochem       Date:  1997-03-15

3.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

4.  Benzoate fermentation by the anaerobic bacterium Syntrophus aciditrophicus in the absence of hydrogen-using microorganisms.

Authors:  M S Elshahed; M J McInerney
Journal:  Appl Environ Microbiol       Date:  2001-12       Impact factor: 4.792

5.  Cyclohexa-1,5-diene-1-carbonyl-CoA hydratase [corrected], an enzyme involved in anaerobic metabolism of benzoyl-CoA in the denitrifying bacterium Thauera aromatica.

Authors:  D Laempe; W Eisenreich; A Bacher; G Fuchs
Journal:  Eur J Biochem       Date:  1998-08-01

6.  Iron-reducing bacteria unravel novel strategies for the anaerobic catabolism of aromatic compounds.

Authors:  Manuel Carmona; Eduardo Díaz
Journal:  Mol Microbiol       Date:  2005-12       Impact factor: 3.501

7.  Nonaromatic products from anoxic conversion of benzoyl-CoA with benzoyl-CoA reductase and cyclohexa-1,5-diene-1-carbonyl-CoA hydratase.

Authors:  M Boll; D Laempe; W Eisenreich; A Bacher; T Mittelberger; J Heinze; G Fuchs
Journal:  J Biol Chem       Date:  2000-07-21       Impact factor: 5.157

8.  The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp. strain CIB.

Authors:  María J López Barragán; Manuel Carmona; María T Zamarro; Bärbel Thiele; Matthias Boll; Georg Fuchs; José L García; Eduardo Díaz
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

9.  Purification and characterization of benzoyl-CoA ligase from a syntrophic, benzoate-degrading, anaerobic mixed culture.

Authors:  G Auburger; J Winter
Journal:  Appl Microbiol Biotechnol       Date:  1992-09       Impact factor: 4.813

10.  Selenocysteine-containing proteins in anaerobic benzoate metabolism of Desulfococcus multivorans.

Authors:  Franziska Peters; Michael Rother; Matthias Boll
Journal:  J Bacteriol       Date:  2004-04       Impact factor: 3.490

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  22 in total

1.  Identification and characterization of a succinyl-coenzyme A (CoA):benzoate CoA transferase in Geobacter metallireducens.

Authors:  Jana Oberender; Johannes W Kung; Jana Seifert; Martin von Bergen; Matthias Boll
Journal:  J Bacteriol       Date:  2012-03-09       Impact factor: 3.490

Review 2.  Microbial degradation of aromatic compounds - from one strategy to four.

Authors:  Georg Fuchs; Matthias Boll; Johann Heider
Journal:  Nat Rev Microbiol       Date:  2011-10-03       Impact factor: 60.633

3.  "Candidatus Cloacamonas acidaminovorans": genome sequence reconstruction provides a first glimpse of a new bacterial division.

Authors:  Eric Pelletier; Annett Kreimeyer; Stéphanie Bocs; Zoé Rouy; Gábor Gyapay; Rakia Chouari; Delphine Rivière; Akila Ganesan; Patrick Daegelen; Abdelghani Sghir; Georges N Cohen; Claudine Médigue; Jean Weissenbach; Denis Le Paslier
Journal:  J Bacteriol       Date:  2008-02-01       Impact factor: 3.490

Review 4.  Anaerobic catabolism of aromatic compounds: a genetic and genomic view.

Authors:  Manuel Carmona; María Teresa Zamarro; Blas Blázquez; Gonzalo Durante-Rodríguez; Javier F Juárez; J Andrés Valderrama; María J L Barragán; José Luis García; Eduardo Díaz
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

5.  Combined application of PCR-based functional assays for the detection of aromatic-compound-degrading anaerobes.

Authors:  Kevin Kuntze; Carsten Vogt; Hans-Hermann Richnow; Matthias Boll
Journal:  Appl Environ Microbiol       Date:  2011-05-20       Impact factor: 4.792

6.  Syntrophus aciditrophicus uses the same enzymes in a reversible manner to degrade and synthesize aromatic and alicyclic acids.

Authors:  Kimberly L James; Johannes W Kung; Bryan R Crable; Housna Mouttaki; Jessica R Sieber; Hong H Nguyen; Yanan Yang; Yongming Xie; Jonathan Erde; Neil Q Wofford; Elizabeth A Karr; Joseph A Loo; Rachel R Ogorzalek Loo; Robert P Gunsalus; Michael J McInerney
Journal:  Environ Microbiol       Date:  2019-05       Impact factor: 5.491

7.  Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium.

Authors:  Athanasios Lykidis; Chia-Lung Chen; Susannah G Tringe; Alice C McHardy; Alex Copeland; Nikos C Kyrpides; Philip Hugenholtz; Hervé Macarie; Alejandro Olmos; Oscar Monroy; Wen-Tso Liu
Journal:  ISME J       Date:  2010-08-05       Impact factor: 10.302

8.  The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments.

Authors:  Muktak Aklujkar; Nelson D Young; Dawn Holmes; Milind Chavan; Carla Risso; Hajnalka E Kiss; Cliff S Han; Miriam L Land; Derek R Lovley
Journal:  BMC Genomics       Date:  2010-09-09       Impact factor: 3.969

9.  Differential membrane proteome analysis reveals novel proteins involved in the degradation of aromatic compounds in Geobacter metallireducens.

Authors:  Dimitri Heintz; Sébastien Gallien; Simon Wischgoll; Anja Kerstin Ullmann; Christine Schaeffer; Antje Karen Kretzschmar; Alain van Dorsselaer; Matthias Boll
Journal:  Mol Cell Proteomics       Date:  2009-06-03       Impact factor: 5.911

10.  Decarboxylating and nondecarboxylating glutaryl-coenzyme A dehydrogenases in the aromatic metabolism of obligately anaerobic bacteria.

Authors:  Simon Wischgoll; Martin Taubert; Franziska Peters; Nico Jehmlich; Martin von Bergen; Matthias Boll
Journal:  J Bacteriol       Date:  2009-04-24       Impact factor: 3.490

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