Literature DB >> 17121858

Highly conserved residues Asp-197 and His-250 in Agp1 phytochrome control the proton affinity of the chromophore and Pfr formation.

David von Stetten1, Sven Seibeck, Norbert Michael, Patrick Scheerer, Maria Andrea Mroginski, Daniel H Murgida, Norbert Krauss, Maarten P Heyn, Peter Hildebrandt, Berthold Borucki, Tilman Lamparter.   

Abstract

The mutants H250A and D197A of Agp1 phytochrome from Agrobacterium tumefaciens were prepared and investigated by different spectroscopic and biochemical methods. Asp-197 and His-250 are highly conserved amino acids and are part of the hydrogen-bonding network that involves the chromophore. Both substitutions cause a destabilization of the protonated chromophore in the Pr state as revealed by resonance Raman and UV-visible absorption spectroscopy. Titration experiments demonstrate a lowering of the pK(a) from 11.1 (wild type) to 8.8 in H250A and 7.2 in D197A. Photoconversion of the mutants does not lead to the Pfr state. H250A is arrested in a meta-Rc-like state in which the chromophore is deprotonated. For H250A and the wild-type protein, deprotonation of the chromophore in meta-Rc is coupled to the release of a proton to the external medium, whereas the subsequent proton re-uptake, linked to the formation of the Pfr state in the wild-type protein, is not observed for H250A. No transient proton exchange with the external medium occurs in D197A, suggesting that Asp-197 may be the proton release group. Both mutants do not undergo the photo-induced protein structural changes that in the wild-type protein are detectable by size exclusion chromatography. These conformational changes are, therefore, attributed to the meta-Rc --> Pfr transition and most likely coupled to the transient proton re-uptake. The present results demonstrate that Asp-197 and His-250 are essential for stabilizing the protonated chromophore structure in the parent Pr state, which is required for the primary photochemical process, and for the complete photo-induced conversion to the Pfr state.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 17121858     DOI: 10.1074/jbc.M608878200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  42 in total

1.  Bathy phytochromes in rhizobial soil bacteria.

Authors:  Gregor Rottwinkel; Inga Oberpichler; Tilman Lamparter
Journal:  J Bacteriol       Date:  2010-07-30       Impact factor: 3.490

2.  Fluorescence of phytochrome adducts with synthetic locked chromophores.

Authors:  Benjamin Zienicke; Li-Yi Chen; Htoi Khawn; Mostafa A S Hammam; Hideki Kinoshita; Johannes Reichert; Anne S Ulrich; Katsuhiko Inomata; Tilman Lamparter
Journal:  J Biol Chem       Date:  2010-11-11       Impact factor: 5.157

3.  The chromophore structures of the Pr States in plant and bacterial phytochromes.

Authors:  Daniel H Murgida; David von Stetten; Peter Hildebrandt; Pascale Schwinté; Friedrich Siebert; Shivani Sharda; Wolfgang Gärtner; Maria Andrea Mroginski
Journal:  Biophys J       Date:  2007-06-01       Impact factor: 4.033

4.  Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion.

Authors:  Xiaojing Yang; Emina A Stojkovic; Jane Kuk; Keith Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-17       Impact factor: 11.205

5.  Mutational analysis of Deinococcus radiodurans bacteriophytochrome reveals key amino acids necessary for the photochromicity and proton exchange cycle of phytochromes.

Authors:  Jeremiah R Wagner; Junrui Zhang; David von Stetten; Mina Günther; Daniel H Murgida; Maria Andrea Mroginski; Joseph M Walker; Katrina T Forest; Peter Hildebrandt; Richard D Vierstra
Journal:  J Biol Chem       Date:  2008-01-10       Impact factor: 5.157

6.  Subpicosecond midinfrared spectroscopy of the Pfr reaction of phytochrome Agp1 from Agrobacterium tumefaciens.

Authors:  Christian Schumann; Ruth Gross; Matthias M N Wolf; Rolf Diller; Norbert Michael; Tilman Lamparter
Journal:  Biophys J       Date:  2008-01-11       Impact factor: 4.033

7.  Chromophore structure of cyanobacterial phytochrome Cph1 in the Pr state: reconciling structural and spectroscopic data by QM/MM calculations.

Authors:  Maria Andrea Mroginski; David von Stetten; Francisco Velazquez Escobar; Holger M Strauss; Steve Kaminski; Patrick Scheerer; Mina Günther; Daniel H Murgida; Peter Schmieder; Christian Bongards; Wolfgang Gärtner; Jo Mailliet; Jon Hughes; Lars-Oliver Essen; Peter Hildebrandt
Journal:  Biophys J       Date:  2009-05-20       Impact factor: 4.033

8.  The fungal phytochrome FphA from Aspergillus nidulans.

Authors:  Sonja Brandt; David von Stetten; Mina Günther; Peter Hildebrandt; Nicole Frankenberg-Dinkel
Journal:  J Biol Chem       Date:  2008-10-19       Impact factor: 5.157

9.  Unusual spectral properties of bacteriophytochrome Agp2 result from a deprotonation of the chromophore in the red-absorbing form Pr.

Authors:  Benjamin Zienicke; Isabel Molina; René Glenz; Patrick Singer; Dorothee Ehmer; Francisco Velazquez Escobar; Peter Hildebrandt; Rolf Diller; Tilman Lamparter
Journal:  J Biol Chem       Date:  2013-09-13       Impact factor: 5.157

10.  Structure-guided engineering of plant phytochrome B with altered photochemistry and light signaling.

Authors:  Junrui Zhang; Robert J Stankey; Richard D Vierstra
Journal:  Plant Physiol       Date:  2013-01-15       Impact factor: 8.340

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.