Literature DB >> 17121798

A single-nucleotide synonymous mutation in the gag gene controlling human immunodeficiency virus type 1 virion production.

Takaichi Hamano1, Kazuhiro Matsuo, Yurina Hibi, Ann Florence B Victoriano, Naoko Takahashi, Yosio Mabuchi, Tsuyoshi Soji, Shinji Irie, Pathom Sawanpanyalert, Hideki Yanai, Takashi Hara, Shudo Yamazaki, Naoki Yamamoto, Takashi Okamoto.   

Abstract

Viral factors as well as host ones play major roles in the disease progression of human immunodeficiency virus type 1 (HIV-1) infection. We have examined cytotoxic T-lymphocyte activity and HIV-1 DNA PCR results of 312 high-risk seronegative drug users in northern Thailand and identified four seronegative cases positive for both assays. Furthermore, we have identified a synonymous mutation in nucleotide position 75 of the gag p17 gene (A426G) of HIV-1 that belongs to the CRF01_AE virus circulating in Thailand. The replication-competent HIV-1 clone containing the A426G mutation demonstrated a dramatic reduction of virion production and perturbation of viral morphogenesis without affecting viral protein synthesis in cells.

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Year:  2006        PMID: 17121798      PMCID: PMC1797536          DOI: 10.1128/JVI.01596-06

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  26 in total

1.  Isolation and characterization of replication-competent molecular DNA clones of HIV type 1 CRF01_AE with different coreceptor usages.

Authors:  Shigeru Kusagawa; Hironori Sato; Yasuhiro Tomita; Masashi Tatsumi; Kayoko Kato; Kazushi Motomura; Rongge Yang; Yutaka Takebe
Journal:  AIDS Res Hum Retroviruses       Date:  2002-01-20       Impact factor: 2.205

Review 2.  HIV-1 replication.

Authors:  E O Freed
Journal:  Somat Cell Mol Genet       Date:  2001-11

3.  Correlates of nontransmission in US women at high risk of human immunodeficiency virus type 1 infection through sexual exposure.

Authors:  Joan H Skurnick; Paul Palumbo; Anthony DeVico; Barbara L Shacklett; Fred T Valentine; Michael Merges; Roberta Kamin-Lewis; Jiri Mestecky; Thomas Denny; George K Lewis; Joan Lloyd; Robert Praschunus; Amanda Baker; Douglas F Nixon; Sharon Stranford; Robert Gallo; Sten H Vermund; Donald B Louria
Journal:  J Infect Dis       Date:  2002-01-17       Impact factor: 5.226

4.  Clearance of HIV infection in a perinatally infected infant.

Authors:  Y J Bryson; S Pang; L S Wei; R Dickover; A Diagne; I S Chen
Journal:  N Engl J Med       Date:  1995-03-30       Impact factor: 91.245

5.  In vitro identification and characterization of an early complex linking HIV-1 genomic RNA recognition and Pr55Gag multimerization.

Authors:  Ariel Roldan; Rodney S Russell; Bruno Marchand; Matthias Götte; Chen Liang; Mark A Wainberg
Journal:  J Biol Chem       Date:  2004-07-09       Impact factor: 5.157

6.  Determination of HIV type 1 CRF01_AE gag p17 and env-V3 consensus sequences for HIV/AIDS vaccine design.

Authors:  Takaichi Hamano; Pathom Sawanpanyalert; Hideki Yanai; Surachai Piyaworawong; Takashi Hara; Sompong Sapsutthipas; Jurairat Phromjai; Shudo Yamazaki; Naoki Yamamoto; Paijit Warachit; Mitsuo Honda; Kazuhiro Matsuo
Journal:  AIDS Res Hum Retroviruses       Date:  2004-03       Impact factor: 2.205

7.  HIV-specific cytotoxic T-cell activity in an HIV-exposed but uninfected infant.

Authors:  S L Rowland-Jones; D F Nixon; M C Aldhous; F Gotch; K Ariyoshi; N Hallam; J S Kroll; K Froebel; A McMichael
Journal:  Lancet       Date:  1993-04-03       Impact factor: 79.321

8.  Persistence of extraordinarily low levels of genetically homogeneous human immunodeficiency virus type 1 in exposed seronegative individuals.

Authors:  Tuofu Zhu; Lawrence Corey; Yon Hwangbo; Jean M Lee; Gerald H Learn; James I Mullins; M Juliana McElrath
Journal:  J Virol       Date:  2003-06       Impact factor: 5.103

9.  Functional chimeras of the Rous sarcoma virus and human immunodeficiency virus gag proteins.

Authors:  R P Bennett; T D Nelle; J W Wills
Journal:  J Virol       Date:  1993-11       Impact factor: 5.103

10.  Human immunodeficiency virus (HIV) nef-specific cytotoxic T lymphocytes in noninfected heterosexual contact of HIV-infected patients.

Authors:  P Langlade-Demoyen; N Ngo-Giang-Huong; F Ferchal; E Oksenhendler
Journal:  J Clin Invest       Date:  1994-03       Impact factor: 14.808

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  9 in total

1.  The effects of the codon usage and translation speed on protein folding of 3D(pol) of foot-and-mouth disease virus.

Authors:  Xiao-Xia Ma; Yu-Ping Feng; Jun-Lin Liu; Bing Ma; Li Chen; Yong-Qing Zhao; Peng-Hui Guo; Jun-Zhen Guo; Zhong-Ren Ma; Jie Zhang
Journal:  Vet Res Commun       Date:  2013-05-29       Impact factor: 2.459

2.  Synonymous codon changes in the oncogenes of the cottontail rabbit papillomavirus lead to increased oncogenicity and immunogenicity of the virus.

Authors:  Nancy M Cladel; Lynn R Budgeon; Jiafen Hu; Karla K Balogh; Neil D Christensen
Journal:  Virology       Date:  2013-02-20       Impact factor: 3.616

3.  Human microRNA hsa-miR-296-5p suppresses enterovirus 71 replication by targeting the viral genome.

Authors:  Zhenhua Zheng; Xianliang Ke; Meng Wang; Siyi He; Qian Li; Caishang Zheng; Zhenfeng Zhang; Yan Liu; Hanzhong Wang
Journal:  J Virol       Date:  2013-03-06       Impact factor: 5.103

4.  Comparative genomic and phylogenetic analysis of the first Usutu virus isolate from a human patient presenting with neurological symptoms.

Authors:  Paolo Gaibani; Francesca Cavrini; Ernest A Gould; Giada Rossini; Anna Pierro; Maria Paola Landini; Vittorio Sambri
Journal:  PLoS One       Date:  2013-05-31       Impact factor: 3.240

5.  Synonymous codon usage influences the local protein structure observed.

Authors:  Rhodri Saunders; Charlotte M Deane
Journal:  Nucleic Acids Res       Date:  2010-06-08       Impact factor: 16.971

Review 6.  Codon usage: nature's roadmap to expression and folding of proteins.

Authors:  Evelina Angov
Journal:  Biotechnol J       Date:  2011-05-12       Impact factor: 4.677

Review 7.  Genetic code redundancy and its influence on the encoded polypeptides.

Authors:  Paige S Spencer; José M Barral
Journal:  Comput Struct Biotechnol J       Date:  2012-03-20       Impact factor: 7.271

8.  Molecular signature of high yield (growth) influenza a virus reassortants prepared as candidate vaccine seeds.

Authors:  Manojkumar Ramanunninair; Jianhua Le; Shiroh Onodera; Andrew A Fulvini; Barbara A Pokorny; Jeanmarie Silverman; Rene Devis; Jennifer M Arroyo; Yu He; Alex Boyne; Jayati Bera; Rebecca Halpin; Erin Hine; David J Spiro; Doris Bucher
Journal:  PLoS One       Date:  2013-06-11       Impact factor: 3.240

9.  Silent mutations at codons 65 and 66 in reverse transcriptase alleviate indel formation and restore fitness in subtype B HIV-1 containing D67N and K70R drug resistance mutations.

Authors:  Sushama Telwatte; Anna C Hearps; Adam Johnson; Catherine F Latham; Katie Moore; Paul Agius; Mary Tachedjian; Secondo Sonza; Nicolas Sluis-Cremer; P Richard Harrigan; Gilda Tachedjian
Journal:  Nucleic Acids Res       Date:  2015-03-12       Impact factor: 16.971

  9 in total

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