Literature DB >> 17120281

Origin of spectral tuning in rhodopsin--it is not the binding pocket.

Sivakumar Sekharan1, Minoru Sugihara, Volker Buss.   

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Year:  2007        PMID： 17120281     DOI： 10.1002/anie.200603306

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


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  21 in total

1.  Color vision: "OH-site" rule for seeing red and green.

Authors:  Sivakumar Sekharan; Kota Katayama; Hideki Kandori; Keiji Morokuma
Journal:  J Am Chem Soc       Date:  2012-06-18       Impact factor: 15.419

Review 2.  Quantum mechanical/molecular mechanical studies on spectral tuning mechanisms of visual pigments and other photoactive proteins.

Authors:  Ahmet Altun; Shozo Yokoyama; Keiji Morokuma
Journal:  Photochem Photobiol       Date:  2008-03-07       Impact factor: 3.421

Review 3.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

4.  The EF loop in green proteorhodopsin affects conformation and photocycle dynamics.

Authors:  Michaela Mehler; Frank Scholz; Sandra J Ullrich; Jiafei Mao; Markus Braun; Lynda J Brown; Richard C D Brown; Sarah A Fiedler; Johanna Becker-Baldus; Josef Wachtveitl; Clemens Glaubitz
Journal:  Biophys J       Date:  2013-07-16       Impact factor: 4.033

5.  Vivid watercolor paintbox for eukaryotic algae.

Authors:  Katrina T Forest
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-08       Impact factor: 11.205

6.  Quantum mechanical/molecular mechanical structure, enantioselectivity, and spectroscopy of hydroxyretinals and insights into the evolution of color vision in small white butterflies.

Authors:  Sivakumar Sekharan; Shozo Yokoyama; Keiji Morokuma
Journal:  J Phys Chem B       Date:  2011-12-06       Impact factor: 2.991

Review 7.  The photochemical determinants of color vision: revealing how opsins tune their chromophore's absorption wavelength.

Authors:  Wenjing Wang; James H Geiger; Babak Borhan
Journal:  Bioessays       Date:  2013-10-24       Impact factor: 4.345

8.  Beyond spectral tuning: human cone visual pigments adopt different transient conformations for chromophore regeneration.

Authors:  Sundaramoorthy Srinivasan; Arnau Cordomí; Eva Ramon; Pere Garriga
Journal:  Cell Mol Life Sci       Date:  2015-09-19       Impact factor: 9.261

9.  Color tuning in short wavelength-sensitive human and mouse visual pigments: ab initio quantum mechanics/molecular mechanics studies.

Authors:  Ahmet Altun; Shozo Yokoyama; Keiji Morokuma
Journal:  J Phys Chem A       Date:  2009-10-29       Impact factor: 2.781

10.  Spectral tuning in visual pigments: an ONIOM(QM:MM) study on bovine rhodopsin and its mutants.

Authors:  Ahmet Altun; Shozo Yokoyama; Keiji Morokuma
Journal:  J Phys Chem B       Date:  2008-05-13       Impact factor: 2.991
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