Literature DB >> 17116685

Estimating true antimalarial efficacy by heteroduplex tracking assay in patients with complex Plasmodium falciparum infections.

Jesse J Kwiek1, Alisa P Alker, Emily C Wenink, Marjorie Chaponda, Linda V Kalilani, Steven R Meshnick.   

Abstract

Heteroduplex tracking assays (HTAs) of Plasmodium falciparum merozoite surface protein 1 block-2 were used to assess complexity of infection and treatment efficacy in a trial of three antimalarial treatments in 141 Malawian pregnant women. An elevated complexity of infection (COI) was associated with anemia, parasite burden, and human immunodeficiency virus infection but was not associated with age or gravidity. Comparisons of HTA patterns before and after treatment allowed the classification of 20 of 30 (66%) recurrent episodes as either definite treatment failures or reinfections. An elevated COI was strongly associated with treatment failure (P=0.003). An algorithm was developed to assign a probability of failure for the 10 indeterminate participants, some of whose infections shared a single variant of high prevalence (>10%). By summing these probabilities, treatment efficacy was estimated.

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Year:  2006        PMID: 17116685      PMCID: PMC1797746          DOI: 10.1128/AAC.00902-06

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN: 0066-4804            Impact factor:   5.191


  24 in total

1.  Position and degree of mismatches and the mobility of DNA heteroduplexes.

Authors:  D A Upchurch; R Shankarappa; J I Mullins
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Plasmodium falciparum genotyping by microsatellites as a method to distinguish between recrudescent and new infections.

Authors:  Atunga Nyachieo; Chantal VAN Overmeir; Thierry Laurent; Jean-Claude Dujardin; Umberto D'Alessandro
Journal:  Am J Trop Med Hyg       Date:  2005-07       Impact factor: 2.345

3.  Distinguishing recrudescences from new infections in antimalarial clinical trials: major impact of interpretation of genotyping results on estimates of drug efficacy.

Authors:  Madeline Slater; Moses Kiggundu; Chris Dokomajilar; Moses R Kamya; Nathan Bakyaita; Ambrose Talisuna; Philip J Rosenthal; Grant Dorsey
Journal:  Am J Trop Med Hyg       Date:  2005-08       Impact factor: 2.345

4.  Measuring allelic heterogeneity in Plasmodium falciparum by a heteroduplex tracking assay.

Authors:  Warunee Ngrenngarmlert; Jesse J Kwiek; Deborah D Kamwendo; Kimberly Ritola; Ronald Swanstrom; Chansuda Wongsrichanalai; R Scott Miller; Wanida Ittarat; Steven R Meshnick
Journal:  Am J Trop Med Hyg       Date:  2005-06       Impact factor: 2.345

5.  Allelic dimorphism in a surface antigen gene of the malaria parasite Plasmodium falciparum.

Authors:  K Tanabe; M Mackay; M Goman; J G Scaife
Journal:  J Mol Biol       Date:  1987-05-20       Impact factor: 5.469

6.  The global distribution of clinical episodes of Plasmodium falciparum malaria.

Authors:  Robert W Snow; Carlos A Guerra; Abdisalan M Noor; Hla Y Myint; Simon I Hay
Journal:  Nature       Date:  2005-03-10       Impact factor: 49.962

7.  Genetic relationships determined by a DNA heteroduplex mobility assay: analysis of HIV-1 env genes.

Authors:  E L Delwart; E G Shpaer; J Louwagie; F E McCutchan; M Grez; H Rübsamen-Waigmann; J I Mullins
Journal:  Science       Date:  1993-11-19       Impact factor: 47.728

8.  Complexity of Plasmodium falciparum infections and antimalarial drug efficacy at 7 sites in Uganda.

Authors:  Sulggi A Lee; Adoke Yeka; Samuel L Nsobya; Christian Dokomajilar; Philip J Rosenthal; Ambrose Talisuna; Grant Dorsey
Journal:  J Infect Dis       Date:  2006-03-13       Impact factor: 5.226

9.  Turnover of env variable region 1 and 2 genotypes in subjects with late-stage human immunodeficiency virus type 1 infection.

Authors:  Kathryn M Kitrinos; Noah G Hoffman; Julie A E Nelson; Ronald Swanstrom
Journal:  J Virol       Date:  2003-06       Impact factor: 5.103

10.  Validation of a simplified method for using molecular markers to predict sulfadoxine-pyrimethamine treatment failure in African children with falciparum malaria.

Authors:  Daniel Kyabayinze; Adithya Cattamanchi; Moses R Kamya; Philip J Rosenthal; Grant Dorsey
Journal:  Am J Trop Med Hyg       Date:  2003-09       Impact factor: 2.345

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  23 in total

1.  Impact of transmission intensity on the accuracy of genotyping to distinguish recrudescence from new infection in antimalarial clinical trials.

Authors:  Bryan Greenhouse; Christian Dokomajilar; Alan Hubbard; Philip J Rosenthal; Grant Dorsey
Journal:  Antimicrob Agents Chemother       Date:  2007-06-25       Impact factor: 5.191

2.  Persistence of Plasmodium falciparum parasites in infected pregnant Mozambican women after delivery.

Authors:  Elisa Serra-Casas; Clara Menéndez; Carlota Dobaño; Azucena Bardají; Llorenç Quintó; Llorençc Quintó; Jaume Ordi; Betuel Sigauque; Pau Cisteró; Inacio Mandomando; Pedro L Alonso; Alfredo Mayor
Journal:  Infect Immun       Date:  2010-11-01       Impact factor: 3.441

3.  Exposing malaria in-host diversity and estimating population diversity by capture-recapture using massively parallel pyrosequencing.

Authors:  Jonathan J Juliano; Kimberly Porter; Victor Mwapasa; Rithy Sem; William O Rogers; Frédéric Ariey; Chansuda Wongsrichanalai; Andrew Read; Steven R Meshnick
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

4.  Using Amplicon Deep Sequencing to Detect Genetic Signatures of Plasmodium vivax Relapse.

Authors:  Jessica T Lin; Nicholas J Hathaway; David L Saunders; Chanthap Lon; Sujata Balasubramanian; Oksana Kharabora; Panita Gosi; Sabaithip Sriwichai; Laurel Kartchner; Char Meng Chuor; Prom Satharath; Charlotte Lanteri; Jeffrey A Bailey; Jonathan J Juliano
Journal:  J Infect Dis       Date:  2015-03-06       Impact factor: 5.226

5.  Individual Plasmodium vivax msp1 variants within polyclonal P. vivax infections display different propensities for relapse.

Authors:  Jessica T Lin; Jonathan J Juliano; Oksana Kharabora; Rithy Sem; Feng-Chang Lin; Sinuon Muth; Didier Ménard; Chansuda Wongsrichanalai; William O Rogers; Steven R Meshnick
Journal:  J Clin Microbiol       Date:  2012-01-11       Impact factor: 5.948

6.  Relevance of undetectably rare resistant malaria parasites in treatment failure: experimental evidence from Plasmodium chabaudi.

Authors:  Silvie Huijben; Brian H K Chan; Andrew F Read
Journal:  Am J Trop Med Hyg       Date:  2015-05-04       Impact factor: 2.345

7.  The perils of PCR: can we accurately 'correct' antimalarial trials?

Authors:  Jonathan J Juliano; Nahla Gadalla; Colin J Sutherland; Steven R Meshnick
Journal:  Trends Parasitol       Date:  2010-01-18

8.  Novel dhps and pfcrt polymorphisms in Plasmodium falciparum detected by heteroduplex tracking assay.

Authors:  Jonathan J Juliano; David J Bacon; Jianbing Mu; Xinhua Wang; Steven R Meshnick
Journal:  Am J Trop Med Hyg       Date:  2009-05       Impact factor: 2.345

9.  Nonradioactive heteroduplex tracking assay for the detection of minority-variant chloroquine-resistant Plasmodium falciparum in Madagascar.

Authors:  Jonathan J Juliano; Milijaona Randrianarivelojosia; Benjamin Ramarosandratana; Frédéric Ariey; Victor Mwapasa; Steven R Meshnick
Journal:  Malar J       Date:  2009-03-16       Impact factor: 2.979

10.  Gel versus capillary electrophoresis genotyping for categorizing treatment outcomes in two anti-malarial trials in Uganda.

Authors:  Vinay Gupta; Grant Dorsey; Alan E Hubbard; Philip J Rosenthal; Bryan Greenhouse
Journal:  Malar J       Date:  2010-01-15       Impact factor: 2.979

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