Literature DB >> 17114226

Protein particulates: another generic form of protein aggregation?

Mark R H Krebs1, Glyn L Devlin, A M Donald.   

Abstract

Protein aggregation is a problem with a multitude of consequences, ranging from affecting protein expression to its implication in many diseases. Of recent interest is the specific form of aggregation leading to the formation of amyloid fibrils, structures associated with diseases such as Alzheimer's disease. The ability to form amyloid fibrils is now regarded as a property generic to all polypeptide chains. Here we show that around the isoelectric point a different generic form of aggregation can also occur by studying seven widely different, nonrelated proteins that are also all known to form amyloid fibrils. Under these conditions gels consisting of relatively monodisperse spherical particulates are formed. Although these gels have been described before for beta-lactoglobulin, our results suggest that the formation of particulates in the regime where charge on the molecules is minimal is a common property of all proteins. Because the proteins used here also form amyloid fibrils, we further propose that protein misfolding into clearly defined aggregates is a generic process whose outcome depends solely on the general properties of the state the protein is in when aggregation occurs, rather than the specific amino acid sequence. Thus under conditions of high net charge, amyloid fibrils form, whereas under conditions of low net charge, particulates form. This observation furthermore suggests that the rules of soft matter physics apply to these systems.

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Year:  2006        PMID: 17114226      PMCID: PMC1783882          DOI: 10.1529/biophysj.106.094342

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  40 in total

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Authors:  V J Lin; J L Koenig
Journal:  Biopolymers       Date:  1976-01       Impact factor: 2.505

2.  Observation of sequence specificity in the seeding of protein amyloid fibrils.

Authors:  Mark R H Krebs; Ludmilla A Morozova-Roche; Katie Daniel; Carol V Robinson; Christopher M Dobson
Journal:  Protein Sci       Date:  2004-07       Impact factor: 6.725

3.  Insulin forms amyloid in a strain-dependent manner: an FT-IR spectroscopic study.

Authors:  Wojciech Dzwolak; Vytautas Smirnovas; Ralf Jansen; Roland Winter
Journal:  Protein Sci       Date:  2004-05-28       Impact factor: 6.725

4.  Prediction of the absolute aggregation rates of amyloidogenic polypeptide chains.

Authors:  Kateri F DuBay; Amol P Pawar; Fabrizio Chiti; Jesús Zurdo; Christopher M Dobson; Michele Vendruscolo
Journal:  J Mol Biol       Date:  2004-08-27       Impact factor: 5.469

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Authors:  H A McKenzie; F H White
Journal:  Adv Protein Chem       Date:  1991

6.  Normal transthyretin and synthetic transthyretin fragments form amyloid-like fibrils in vitro.

Authors:  A Gustavsson; U Engström; P Westermark
Journal:  Biochem Biophys Res Commun       Date:  1991-03-29       Impact factor: 3.575

7.  Resolution-enhanced Fourier transform infrared spectroscopy of enzymes.

Authors:  H Susi; D M Byler
Journal:  Methods Enzymol       Date:  1986       Impact factor: 1.600

8.  Principles that govern the folding of protein chains.

Authors:  C B Anfinsen
Journal:  Science       Date:  1973-07-20       Impact factor: 47.728

9.  The formation of spherulites by amyloid fibrils of bovine insulin.

Authors:  Mark R H Krebs; Cait E Macphee; Aline F Miller; Iain E Dunlop; Christopher M Dobson; Athene M Donald
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-20       Impact factor: 11.205

10.  Partial denaturation of transthyretin is sufficient for amyloid fibril formation in vitro.

Authors:  W Colon; J W Kelly
Journal:  Biochemistry       Date:  1992-09-15       Impact factor: 3.162

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  17 in total

1.  An oligomeric equilibrium intermediate as the precursory nucleus of globular and fibrillar supramacromolecular assemblies in a PDZ domain.

Authors:  Javier Murciano-Calles; Eva S Cobos; Pedro L Mateo; Ana Camara-Artigas; Jose C Martinez
Journal:  Biophys J       Date:  2010-07-07       Impact factor: 4.033

2.  Hydrophobic cooperativity as a mechanism for amyloid nucleation.

Authors:  Ronald D Hills; Charles L Brooks
Journal:  J Mol Biol       Date:  2007-02-24       Impact factor: 5.469

3.  Protein phase behavior in aqueous solutions: crystallization, liquid-liquid phase separation, gels, and aggregates.

Authors:  André C Dumetz; Aaron M Chockla; Eric W Kaler; Abraham M Lenhoff
Journal:  Biophys J       Date:  2008-01-15       Impact factor: 4.033

4.  Aggregation of a multidomain protein: a coagulation mechanism governs aggregation of a model IgG1 antibody under weak thermal stress.

Authors:  Christian Beyschau Andersen; Mauro Manno; Christian Rischel; Matthías Thórólfsson; Vincenzo Martorana
Journal:  Protein Sci       Date:  2010-02       Impact factor: 6.725

5.  Irreversible gelation of thermally unfolded proteins: structural and mechanical properties of lysozyme aggregates.

Authors:  Samuele Raccosta; Mauro Manno; Donatella Bulone; Daniela Giacomazza; Valeria Militello; Vincenzo Martorana; Pier Luigi San Biagio
Journal:  Eur Biophys J       Date:  2009-07-01       Impact factor: 1.733

6.  Amyloid fibril-like structure underlies the aggregate structure across the pH range for beta-lactoglobulin.

Authors:  Mark R H Krebs; Glyn L Devlin; Athene M Donald
Journal:  Biophys J       Date:  2009-06-17       Impact factor: 4.033

7.  Amphiphilic copolymers reduce aggregation of unfolded lysozyme more effectively than polyethylene glycol.

Authors:  Jaemin Chin; Devkumar Mustafi; Michael J Poellmann; Raphael C Lee
Journal:  Phys Biol       Date:  2017-02-08       Impact factor: 2.583

8.  Glutathionylation primes soluble glyceraldehyde-3-phosphate dehydrogenase for late collapse into insoluble aggregates.

Authors:  Mirko Zaffagnini; Christophe H Marchand; Marco Malferrari; Samuel Murail; Sara Bonacchi; Damiano Genovese; Marco Montalti; Giovanni Venturoli; Giuseppe Falini; Marc Baaden; Stéphane D Lemaire; Simona Fermani; Paolo Trost
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-26       Impact factor: 11.205

9.  What's in a drop? Correlating observations and outcomes to guide macromolecular crystallization experiments.

Authors:  Joseph R Luft; Jennifer R Wolfley; Edward H Snell
Journal:  Cryst Growth Des       Date:  2011-03-02       Impact factor: 4.076

10.  Linking folding with aggregation in Alzheimer's beta-amyloid peptides.

Authors:  Jana Khandogin; Charles L Brooks
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-17       Impact factor: 11.205

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