Literature DB >> 17107124

Inertial suppression of protein dynamics in a binary glycerol-trehalose glass.

Joseph E Curtis, Taner E Dirama, Gustavo A Carri, Douglas J Tobias.   

Abstract

The traditional approach used to predict the ability of a glassy matrix to maximally preserve the activity of a protein solute is the glass transition temperature (T(g)) of the glass. Recently it has been shown that the addition of a low T(g) diluent (glycerol) can rigidify the structure of a high T(g) glassy matrix in binary glycerol-trehalose glasses. The optimal density of glycerol in trehalose minimizes the average mean square displacements of non-exchangeable protons in the glass samples. The amount of glycerol added to a trehalose glass coincides with the maximal recovery of biological activity in a separate study using similar binary glass samples. In this study, we use molecular dynamics (MD) simulations to investigate the dynamics of a hydrated protein encased in glycerol, unary trehalose and binary glycerol-trehalose glasses. We have found that we are able to reproduce the rigidification of the glycerol-trehalose glassy matrix and that there is a direct correlation between bulk glass dynamics and the extent of atomic fluctuation of protein atoms. The detailed microscopic picture that emerges is that protein dynamics are suppressed mainly by inertia of the bulk glass and to a lesser extent specific interactions at the protein-solvent interface. Thus, the inertia of the glassy matrix may be an influential factor in the determination of pharmaceutically relevant formulations.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 17107124     DOI: 10.1021/jp0615499

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  9 in total

1.  Formulation and stabilization of Francisella tularensis live vaccine strain.

Authors:  Satoshi Ohtake; Russell A Martin; Atul Saxena; David Lechuga-Ballesteros; Araceli E Santiago; Eileen M Barry; Vu Truong-Le
Journal:  J Pharm Sci       Date:  2011-04-13       Impact factor: 3.534

2.  The role of protein-solvent hydrogen bond dynamics in the structural relaxation of a protein in glycerol versus water.

Authors:  Mounir Tarek; Douglas J Tobias
Journal:  Eur Biophys J       Date:  2008-04-22       Impact factor: 1.733

3.  The effect of complex solvents on the structure and dynamics of protein solutions: The case of Lysozyme in trehalose/water mixtures.

Authors:  Pavan K GhattyVenkataKrishna; Gustavo A Carri
Journal:  Eur Phys J E Soft Matter       Date:  2013-02-14       Impact factor: 1.890

4.  Room temperature stabilization of oral, live attenuated Salmonella enterica serovar Typhi-vectored vaccines.

Authors:  Satoshi Ohtake; Russell Martin; Atul Saxena; Binh Pham; Gary Chiueh; Manuel Osorio; Dennis Kopecko; Deqi Xu; David Lechuga-Ballesteros; Vu Truong-Le
Journal:  Vaccine       Date:  2011-02-05       Impact factor: 3.641

5.  Polarizable empirical force field for acyclic polyalcohols based on the classical Drude oscillator.

Authors:  Xibing He; Pedro E M Lopes; Alexander D Mackerell
Journal:  Biopolymers       Date:  2013-10       Impact factor: 2.505

Review 6.  Molecular mechanisms of survival strategies in extreme conditions.

Authors:  Salvatore Magazù; Federica Migliardo; Miguel A Gonzalez; Claudia Mondelli; Stewart F Parker; Beata G Vertessy
Journal:  Life (Basel)       Date:  2012-12-07

Review 7.  Investigating Structure and Dynamics of Proteins in Amorphous Phases Using Neutron Scattering.

Authors:  Maria Monica Castellanos; Arnold McAuley; Joseph E Curtis
Journal:  Comput Struct Biotechnol J       Date:  2016-12-21       Impact factor: 7.271

8.  Impact of Sucrose as Osmolyte on Molecular Dynamics of Mouse Acetylcholinesterase.

Authors:  Sofya V Lushchekina; Gaetan Inidjel; Nicolas Martinez; Patrick Masson; Marie Trovaslet-Leroy; Florian Nachon; Michael Marek Koza; Tilo Seydel; Judith Peters
Journal:  Biomolecules       Date:  2020-12-12

Review 9.  Antiplasticization of Polymer Materials: Structural Aspects and Effects on Mechanical and Diffusion-Controlled Properties.

Authors:  Leno Mascia; Yannis Kouparitsas; Davide Nocita; Xujin Bao
Journal:  Polymers (Basel)       Date:  2020-04-01       Impact factor: 4.329

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.