Literature DB >> 17098790

Optical band splitting and electronic perturbations of the heme chromophore in cytochrome C at room temperature probed by visible electronic circular dichroism spectroscopy.

Isabelle Dragomir1, Andrew Hagarman, Carmichael Wallace, Reinhard Schweitzer-Stenner.   

Abstract

We have measured the electronic circular dichroism (ECD) of the ferri- and ferro-states of several natural cytochrome c derivatives (horse heart, chicken, bovine, and yeast) and the Y67F mutant of yeast in the region between 300 and 750 nm. Thus, we recorded the ECD of the B- and Q-band region as well as the charge-transfer band at approximately 695 nm. The B-band region of the ferri-state displays a nearly symmetric couplet at the B0-position that overlaps with a couplet 790 cm-1 higher in energy, which we assigned to a vibronic side-band transition. For the ferro-state, the couplet is greatly reduced, but still detectable. The B-band region is dominated by a positive Cotton effect at energies lower than B0 that is attributed to a magnetically allowed iron-->heme charge-transfer transition as earlier observed for nitrosyl myoglobin and hemoglobin. The Q-band region of the ferri-state is poorly resolved, but displays a pronounced positive signal at higher wavenumbers. This must result from a magnetically allowed transition, possibly from the methionine ligand to the dxy-hole of Fe3+. For the ferro-state, the spectra resolve the vibronic structure of the Qv-band. A more detailed spectral analysis reveals that the positively biased spectrum can be understood as a superposition of asymmetric couplets of split Q0 and Qv-states. Substantial qualitative and quantitative differences between the respective B-state and Q-state ECD spectra of yeast and horse heart cytochrome c can clearly be attributed to the reduced band splitting in the former, which results from a less heterogeneous internal electric field. Finally, we investigated the charge-transfer band at 695 nm in the ferri-state spectrum and found that it is composed of at least three bands, which are assignable to different taxonomic substates. The respective subbands differ somewhat with respect to their Kuhn anisotropy ratio and their intensity ratios are different for horse and yeast cytochrome c. Our data therefore suggests different substate populations for these proteins, which is most likely assignable to a structural heterogeneity of the distal Fe-M80 coordination of the heme chromophore.

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Year:  2006        PMID: 17098790      PMCID: PMC1779974          DOI: 10.1529/biophysj.106.095976

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  26 in total

1.  The importance of vibronic perturbations in ferrocytochrome c spectra: a reevaluation of spectral properties based on low-temperature optical absorption, resonance Raman, and molecular-dynamics simulations.

Authors:  Matteo Levantino; Qing Huang; Antonio Cupane; Monique Laberge; Andrew Hagarman; Reinhard Schweitzer-Stenner
Journal:  J Chem Phys       Date:  2005-08-01       Impact factor: 3.488

2.  Photon echo spectroscopy of porphyrins and heme proteins: effects of quasidegenerate electronic structure on the peak shift decay.

Authors:  Byung Moon Cho; C Fredrik Carlsson; Ralph Jimenez
Journal:  J Chem Phys       Date:  2006-04-14       Impact factor: 3.488

Review 3.  Intrinsic protein electric fields: basic non-covalent interactions and relationship to protein-induced Stark effects.

Authors:  M Laberge
Journal:  Biochim Biophys Acta       Date:  1998-08-18

4.  Heme distortions in sperm-whale carbonmonoxy myoglobin: correlations between rotational strengths and heme distortions in MD-generated structures.

Authors:  Christoph Kiefl; Narasimha Sreerama; Raid Haddad; Lisong Sun; Walter Jentzen; Yi Lu; Yan Qiu; John A Shelnutt; Robert W Woody
Journal:  J Am Chem Soc       Date:  2002-04-03       Impact factor: 15.419

5.  Linkage of functional and structural heterogeneity in proteins: dynamic hole burning in carboxymyoglobin.

Authors:  B F Campbell; M R Chance; J M Friedman
Journal:  Science       Date:  1987-10-16       Impact factor: 47.728

6.  Alkaline isomerization of oxidized cytochrome c. Equilibrium and kinetic measurements.

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Journal:  J Biol Chem       Date:  1974-04-25       Impact factor: 5.157

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Journal:  Proc Natl Acad Sci U S A       Date:  1985-08       Impact factor: 11.205

8.  Single-crystal spectra of ferrimyoglobin complexes in polarized light.

Authors:  W A Eaton; R M Hochstrasser
Journal:  J Chem Phys       Date:  1968-08-01       Impact factor: 3.488

9.  Optical rotatory properties of the cytochromes c3 from three species of Desulfovibrio.

Authors:  H Drucker; L L Campbell; R W Woody
Journal:  Biochemistry       Date:  1970-03-31       Impact factor: 3.162

10.  The origin of the heme Cotton effects in myoglobin and hemoglobin.

Authors:  M C Hsu; R W Woody
Journal:  J Am Chem Soc       Date:  1971-07-14       Impact factor: 15.419

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  6 in total

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2.  The response of Ω-loop D dynamics to truncation of trimethyllysine 72 of yeast iso-1-cytochrome c depends on the nature of loop deformation.

Authors:  Levi J McClelland; Sean M Seagraves; Md Khurshid Alam Khan; Melisa M Cherney; Swati Bandi; Justin E Culbertson; Bruce E Bowler
Journal:  J Biol Inorg Chem       Date:  2015-05-07       Impact factor: 3.358

3.  Nonadditive interactions in protein folding: the zipper model of cytochrome C.

Authors:  A N Morozov; Y J Shiu; C T Liang; M Y Tsai; S H Lin
Journal:  J Biol Phys       Date:  2008-04-12       Impact factor: 1.365

4.  Disruption of a hydrogen bond network in human versus spider monkey cytochrome c affects heme crevice stability.

Authors:  Matthew E Goldes; Margaret E Jeakins-Cooley; Levi J McClelland; Tung-Chung Mou; Bruce E Bowler
Journal:  J Inorg Biochem       Date:  2015-12-31       Impact factor: 4.155

5.  pH dependence of cyanide binding to the ferric heme domain of the direct oxygen sensor from Escherichia coli and the effect of alkaline denaturation.

Authors:  Anil K Bidwai; Esther Y Ok; James E Erman
Journal:  Biochemistry       Date:  2008-09-05       Impact factor: 3.162

6.  Structural and functional insights into lysine acetylation of cytochrome c using mimetic point mutants.

Authors:  Inmaculada Márquez; Gonzalo Pérez-Mejías; Alejandra Guerra-Castellano; José Luis Olloqui-Sariego; Rafael Andreu; Juan José Calvente; Miguel A De la Rosa; Irene Díaz-Moreno
Journal:  FEBS Open Bio       Date:  2021-11-09       Impact factor: 2.693

  6 in total

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