Literature DB >> 16626243

Photon echo spectroscopy of porphyrins and heme proteins: effects of quasidegenerate electronic structure on the peak shift decay.

Byung Moon Cho1, C Fredrik Carlsson, Ralph Jimenez.   

Abstract

Three pulse photon echo peak shift spectroscopy and transient grating measurements on Zn-substituted cytochrome c, Zn-tetraphenylporphyrin, and Zn-protoporphyrin IX are reported. The effects of protein conformation, axial ligation, and solvent are investigated. Numerical simulations of the peak shift and transient grating experiments are presented. The simulations employed recently derived optical response functions for square-symmetric molecules with doubly degenerate excited states. Simulations exploring the effects of excited-state energy splitting, symmetric and asymmetric fluctuations, and excited-state lifetime show that the time scales of the peak shift decay in the three-level system largely reflect the same dynamics as in the two-level system. However, the asymptotic peak shift, which is a clear indicator of inhomogeneous broadening in a two-level system, must be interpreted more carefully for three-level systems, as it is also influenced by the magnitude of the excited-state splitting. The calculated signals qualitatively reproduce the data.

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Year:  2006        PMID: 16626243     DOI: 10.1063/1.2186318

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Three-pulse photon echo peak shift spectroscopy as a probe of flexibility and conformational heterogeneity in protein folding.

Authors:  Emily A Gibson; Zhaochuan Shen; Ralph Jimenez
Journal:  Chem Phys Lett       Date:  2009-01-01       Impact factor: 2.328

2.  Optical band splitting and electronic perturbations of the heme chromophore in cytochrome C at room temperature probed by visible electronic circular dichroism spectroscopy.

Authors:  Isabelle Dragomir; Andrew Hagarman; Carmichael Wallace; Reinhard Schweitzer-Stenner
Journal:  Biophys J       Date:  2006-11-10       Impact factor: 4.033

  2 in total

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