Literature DB >> 17095106

Identification of hnRNPs K, L and A2/B1 as candidate proteins involved in the nutritional regulation of mRNA splicing.

Brian N Griffith1, Callee M Walsh, Wioletta Szeszel-Fedorowicz, Aaron T Timperman, Lisa M Salati.   

Abstract

Nutrient regulation of glucose-6-phosphate dehydrogenase (G6PD) expression occurs through changes in the rate of splicing of G6PD pre-mRNA. This posttranscriptional mechanism accounts for the 12- to 15-fold increase in G6PD expression in livers of mice that were starved and then refed a high-carbohydrate diet. Regulation of G6PD pre-mRNA splicing requires a cis-acting element in exon 12 of the pre-mRNA. Using RNA probes to exon 12 and nuclear extracts from livers of mice that were starved or refed, proteins of 60 kDa and 37 kDa were detected bound to nucleotides 65-79 of exon 12 and this binding was decreased by 50% with nuclear extracts from refed mice. The proteins were identified as hnRNPs K, L, and A2/B1 by LC-MS/MS. The decrease in binding of these proteins to exon 12 during refeeding was not accompanied by a decrease in the total amount of these proteins in total nuclear extract. HnRNPs K, L and A2/B1 have known roles in the regulation of mRNA splicing. The decrease in binding of these proteins during treatments that increase G6PD expression is consistent with a role for these proteins in the inhibition of G6PD mRNA splicing.

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Year:  2006        PMID: 17095106      PMCID: PMC1828878          DOI: 10.1016/j.bbaexp.2006.10.001

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  54 in total

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3.  Serine/arginine-rich protein-dependent suppression of exon skipping by exonic splicing enhancers.

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4.  Comparative analysis identifies exonic splicing regulatory sequences--The complex definition of enhancers and silencers.

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Journal:  Mol Cell       Date:  2006-06-23       Impact factor: 17.970

5.  Nucleic acid affinity chromatography: preparation and characterization of double-stranded RNA agarose.

Authors:  J O Langland; S M Pettiford; B L Jacobs
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Authors:  Indrani Talukdar; Wioletta Szeszel-Fedorowicz; Lisa M Salati
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7.  An exonic splicing silencer is involved in the regulated splicing of glucose 6-phosphate dehydrogenase mRNA.

Authors:  Wioletta Szeszel-Fedorowicz; Indrani Talukdar; Brian N Griffith; Callee M Walsh; Lisa M Salati
Journal:  J Biol Chem       Date:  2006-09-15       Impact factor: 5.157

8.  Direct analysis of protein complexes using mass spectrometry.

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9.  Regulation of the processing of glucose-6-phosphate dehydrogenase mRNA by nutritional status.

Authors:  B Amir-Ahmady; L M Salati
Journal:  J Biol Chem       Date:  2000-12-21       Impact factor: 5.157

10.  Protein kinase CK2 phosphorylation regulates the interaction of Kaposi's sarcoma-associated herpesvirus regulatory protein ORF57 with its multifunctional partner hnRNP K.

Authors:  Poonam Malik; J Barklie Clements
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  14 in total

1.  Serine arginine splicing factor 3 is involved in enhanced splicing of glucose-6-phosphate dehydrogenase RNA in response to nutrients and hormones in liver.

Authors:  Callee M Walsh; Amanda L Suchanek; Travis J Cyphert; Alison B Kohan; Wioletta Szeszel-Fedorowicz; Lisa M Salati
Journal:  J Biol Chem       Date:  2012-12-11       Impact factor: 5.157

2.  Pharmacological and physiological activation of AMPK improves the spliceopathy in DM1 mouse muscles.

Authors:  Aymeric Ravel-Chapuis; Ali Al-Rewashdy; Guy Bélanger; Bernard J Jasmin
Journal:  Hum Mol Genet       Date:  2018-10-01       Impact factor: 6.150

Review 3.  Functional foods effective for hepatitis C: Identification of oligomeric proanthocyanidin and its action mechanism.

Authors:  Yo-Ichi Ishida; Masahiko Takeshita; Hiroaki Kataoka
Journal:  World J Hepatol       Date:  2014-12-27

4.  Transcriptional regulation of heterogeneous nuclear ribonucleoprotein K gene expression.

Authors:  Liqing He; Xiaochang Xue; Zhengjun Wang; Entai Hou; Yong Liu; Mingyu Liang; Yingqi Zhang; Zhongmin Tian
Journal:  Biochimie       Date:  2014-12-10       Impact factor: 4.079

5.  Heterogeneous nuclear ribonucleoprotein D/AUF1 interacts with heterogeneous nuclear ribonucleoprotein L.

Authors:  Hong-Gyu Park; Ji-Young Yoon; Mieyoung Choi
Journal:  J Biosci       Date:  2007-12       Impact factor: 1.826

6.  The hnRNA-binding proteins hnRNP L and PTB are required for efficient translation of the Cat-1 arginine/lysine transporter mRNA during amino acid starvation.

Authors:  Mithu Majumder; Ibrahim Yaman; Francesca Gaccioli; Vladimir V Zeenko; Chuanping Wang; Mark G Caprara; Richard C Venema; Anton A Komar; Martin D Snider; Maria Hatzoglou
Journal:  Mol Cell Biol       Date:  2009-03-09       Impact factor: 4.272

7.  Cyclical expression of the Notch/Wnt regulator Nrarp requires modulation by Dll3 in somitogenesis.

Authors:  William Sewell; Duncan B Sparrow; Allanceson J Smith; Dorian M Gonzalez; Eric F Rappaport; Sally L Dunwoodie; Kenro Kusumi
Journal:  Dev Biol       Date:  2009-03-03       Impact factor: 3.582

8.  The hnRNP A1 homolog Hrp36 is essential for normal development, female fecundity, omega speckle formation and stress tolerance in Drosophila melanogaster.

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9.  The heterogeneous nuclear ribonucleoprotein L is an essential component in the Ca2+/calmodulin-dependent protein kinase IV-regulated alternative splicing through cytidine-adenosine repeats.

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Journal:  J Biol Chem       Date:  2008-11-18       Impact factor: 5.157

10.  Starvation actively inhibits splicing of glucose-6-phosphate dehydrogenase mRNA via a bifunctional ESE/ESS element bound by hnRNP K.

Authors:  T J Cyphert; A L Suchanek; B N Griffith; L M Salati
Journal:  Biochim Biophys Acta       Date:  2013-04-28
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