Literature DB >> 17081491

Alzheimer's-disease-associated conformation of intrinsically disordered tau protein studied by intrinsically disordered protein liquid-phase competitive enzyme-linked immunosorbent assay.

Rostislav Skrabana1, Michaela Skrabanova-Khuebachova, Peter Kontsek, Michal Novak.   

Abstract

Tau protein, the major constituent of paired helical filaments in Alzheimer's disease, belongs to the intrinsically disordered proteins (IDPs). IDPs are an emerging group in the protein kingdom characterized by the absence of a rigid three-dimensional structure. Disordered proteins usually acquire a "functional fold" upon binding to their interaction partner(s). This property of IDPs implies the need for innovative approaches to measure their binding affinity. We have mapped and measured the Alzheimer's-disease-associated epitope on intrinsically disordered tau protein with a novel two-step sandwich competitive enzyme-linked immunosorbent assay (ELISA). This approach allowed us to determine the binding affinity of disordered tau protein in liquid phase without any disturbance to the competitive equilibrium and without any need for covalent or noncovalent modification of tau protein. Furthermore, the global fitting method, used for the reconstruction of tau binding curves, significantly improved the assay readout. The proposed novel competitive ELISA allowed us to determine the changes in the standard Gibbs energy of binding, thus enabling measurement of tau protein conformation in the core of paired helical filaments. IDP competitive ELISA results showed, for the first time, that the tau protein C terminus of the Alzheimer's-disease-derived paired helical filaments core subunit adopts beta-turn type I' fold and is accessible from solution.

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Year:  2006        PMID: 17081491     DOI: 10.1016/j.ab.2006.09.031

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  6 in total

1.  Extensive tests and evaluation of the CHARMM36IDPSFF force field for intrinsically disordered proteins and folded proteins.

Authors:  Hao Liu; Dong Song; Yangpeng Zhang; Sheng Yang; Ray Luo; Hai-Feng Chen
Journal:  Phys Chem Chem Phys       Date:  2019-10-09       Impact factor: 3.676

2.  Site-specific dynamic nuclear polarization of hydration water as a generally applicable approach to monitor protein aggregation.

Authors:  Anna Pavlova; Evan R McCarney; Dylan W Peterson; Frederick W Dahlquist; John Lew; Songi Han
Journal:  Phys Chem Chem Phys       Date:  2009-06-29       Impact factor: 3.676

3.  The IDP-Specific Force Field ff14IDPSFF Improves the Conformer Sampling of Intrinsically Disordered Proteins.

Authors:  Dong Song; Ray Luo; Hai-Feng Chen
Journal:  J Chem Inf Model       Date:  2017-05-04       Impact factor: 4.956

4.  Fluorescent-labeled antibodies: Balancing functionality and degree of labeling.

Authors:  Shaleen Vira; Elena Mekhedov; Glen Humphrey; Paul S Blank
Journal:  Anal Biochem       Date:  2010-03-31       Impact factor: 3.365

5.  Crystallization and preliminary X-ray diffraction analysis of two peptides from Alzheimer PHF in complex with the MN423 antibody Fab fragment.

Authors:  Rostislav Skrabana; Ondrej Cehlar; Zuzana Flachbartova; Andrej Kovac; Jozef Sevcik; Michal Novak
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-09-25

Review 6.  Protein truncation as a common denominator of human neurodegenerative foldopathies.

Authors:  Santosh Jadhav; Norbert Zilka; Michal Novak
Journal:  Mol Neurobiol       Date:  2013-03-21       Impact factor: 5.590

  6 in total

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