Literature DB >> 17071740

A pathogen-inducible endogenous siRNA in plant immunity.

Surekha Katiyar-Agarwal1, Rebekah Morgan, Douglas Dahlbeck, Omar Borsani, Andy Villegas, Jian-Kang Zhu, Brian J Staskawicz, Hailing Jin.   

Abstract

RNA interference, mediated by small interfering RNAs (siRNAs), is a conserved regulatory process that has evolved as an antiviral defense mechanism in plants and animals. It is not known whether host cells also use siRNAs as an antibacterial defense mechanism in eukaryotes. Here, we report the discovery of an endogenous siRNA, nat-siRNAATGB2, that is specifically induced by the bacterial pathogen Pseudomonas syringae carrying effector avrRpt2. We demonstrate that the biogenesis of this siRNA requires DCL1, HYL1, HEN1, RDR6, NRPD1A, and SGS3. Its induction also depends on the cognate host disease resistance gene RPS2 and the NDR1 gene that is required for RPS2-specified resistance. This siRNA contributes to RPS2-mediated race-specific disease resistance by repressing PPRL, a putative negative regulator of the RPS2 resistance pathway.

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Year:  2006        PMID: 17071740      PMCID: PMC1693862          DOI: 10.1073/pnas.0608258103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Endogenous and silencing-associated small RNAs in plants.

Authors:  Cesar Llave; Kristin D Kasschau; Maggie A Rector; James C Carrington
Journal:  Plant Cell       Date:  2002-07       Impact factor: 11.277

2.  Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins.

Authors:  Joshua L Heazlewood; Julian S Tonti-Filippini; Alexander M Gout; David A Day; James Whelan; A Harvey Millar
Journal:  Plant Cell       Date:  2003-12-11       Impact factor: 11.277

3.  Identification of mammalian mitochondrial proteins that interact with IAPs via N-terminal IAP binding motifs.

Authors:  A M Verhagen; T K Kratina; C J Hawkins; J Silke; P G Ekert; D L Vaux
Journal:  Cell Death Differ       Date:  2006-06-23       Impact factor: 15.828

4.  DICER-LIKE1: blind men and elephants in Arabidopsis development.

Authors:  Stephen E Schauer; Steven E Jacobsen; David W Meinke; Animesh Ray
Journal:  Trends Plant Sci       Date:  2002-11       Impact factor: 18.313

5.  Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis.

Authors:  Ramanjulu Sunkar; Jian-Kang Zhu
Journal:  Plant Cell       Date:  2004-07-16       Impact factor: 11.277

6.  The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation.

Authors:  Meng-Hsuan Han; Saiprasad Goud; Liang Song; Nina Fedoroff
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-13       Impact factor: 11.205

7.  Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.

Authors:  Claire Lurin; Charles Andrés; Sébastien Aubourg; Mohammed Bellaoui; Frédérique Bitton; Clémence Bruyère; Michel Caboche; Cédrig Debast; José Gualberto; Beate Hoffmann; Alain Lecharny; Monique Le Ret; Marie-Laure Martin-Magniette; Hakim Mireau; Nemo Peeters; Jean-Pierre Renou; Boris Szurek; Ludivine Taconnat; Ian Small
Journal:  Plant Cell       Date:  2004-07-21       Impact factor: 11.277

8.  Computational identification of plant microRNAs and their targets, including a stress-induced miRNA.

Authors:  Matthew W Jones-Rhoades; David P Bartel
Journal:  Mol Cell       Date:  2004-06-18       Impact factor: 17.970

9.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

10.  Genetic and functional diversification of small RNA pathways in plants.

Authors:  Zhixin Xie; Lisa K Johansen; Adam M Gustafson; Kristin D Kasschau; Andrew D Lellis; Daniel Zilberman; Steven E Jacobsen; James C Carrington
Journal:  PLoS Biol       Date:  2004-02-24       Impact factor: 8.029

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  184 in total

1.  Co-expression of soybean Dicer-like genes in response to stress and development.

Authors:  Shaun J Curtin; Michael B Kantar; Han W Yoon; Adam M Whaley; Jessica A Schlueter; Robert M Stupar
Journal:  Funct Integr Genomics       Date:  2012-04-15       Impact factor: 3.410

2.  Small RNAs in angiosperm gametophytes: from epigenetics to gamete development.

Authors:  Gaël Le Trionnaire; David Twell
Journal:  Genes Dev       Date:  2010-06-01       Impact factor: 11.361

Review 3.  Cell-to-cell trafficking of RNA and RNA silencing through plasmodesmata.

Authors:  Tae Kyung Hyun; Mohammad Nazim Uddin; Yeonggil Rim; Jae-Yean Kim
Journal:  Protoplasma       Date:  2010-11-02       Impact factor: 3.356

4.  The Functions of RNA-Dependent RNA Polymerases in Arabidopsis.

Authors:  Matthew R Willmann; Matthew W Endres; Rebecca T Cook; Brian D Gregory
Journal:  Arabidopsis Book       Date:  2011-07-31

5.  OsDCL1a activation impairs phytoalexin biosynthesis and compromises disease resistance in rice.

Authors:  Raquel Salvador-Guirao; Patricia Baldrich; Shiho Tomiyama; Yue-Ie Hsing; Kazunori Okada; Blanca San Segundo
Journal:  Ann Bot       Date:  2019-01-01       Impact factor: 4.357

6.  Small-interfering RNAs from natural antisense transcripts derived from a cellulose synthase gene modulate cell wall biosynthesis in barley.

Authors:  Michael A Held; Bryan Penning; Amanda S Brandt; Sarah A Kessans; Weidong Yong; Steven R Scofield; Nicholas C Carpita
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-15       Impact factor: 11.205

Review 7.  Small RNAs as guardians of the genome.

Authors:  Colin D Malone; Gregory J Hannon
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

8.  Regulation of plant innate immunity by three proteins in a complex conserved across the plant and animal kingdoms.

Authors:  Kristoffer Palma; Qingguo Zhao; Yu Ti Cheng; Dongling Bi; Jacqueline Monaghan; Wei Cheng; Yuelin Zhang; Xin Li
Journal:  Genes Dev       Date:  2007-06-15       Impact factor: 11.361

9.  ARGONAUTE4 is required for resistance to Pseudomonas syringae in Arabidopsis.

Authors:  Astrid Agorio; Pablo Vera
Journal:  Plant Cell       Date:  2007-11-09       Impact factor: 11.277

10.  A rice cis-natural antisense RNA acts as a translational enhancer for its cognate mRNA and contributes to phosphate homeostasis and plant fitness.

Authors:  Mehdi Jabnoune; David Secco; Cécile Lecampion; Christophe Robaglia; Qingyao Shu; Yves Poirier
Journal:  Plant Cell       Date:  2013-10-04       Impact factor: 11.277

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