Literature DB >> 17064729

Insights into molecular plasticity of choline binding proteins (pneumococcal surface proteins) by SAXS.

Rubén M Buey1, Begoña Monterroso, Margarita Menéndez, Greg Diakun, Pablo Chacón, Juan Antonio Hermoso, J Fernando Díaz.   

Abstract

Phosphocholine moieties decorating the pneumococcal surface are used as a docking station for a family of modular proteins, the so-called choline binding proteins or CBPs. Choline recognition is essential for CBPs function and may also be a determinant for their quaternary structure. There is little knowledge about modular arrangement or oligomeric structures in this family. Therefore, we have used the small angle X-ray scattering (SAXS) technique combined with analytical ultracentrifugation in order to model the three-dimensional envelope of two highly different CBPs: the phage encoded Cpl-1 lysozyme and the pneumococcal phosphorylcholine esterase Pce. Both enzymes have an N-terminal catalytic module and a C-terminal choline-binding module (CBM) that attaches them to the bacterial surface and comprises six and ten sequence repeats in Cpl-1 and Pce, respectively. SAXS experiments have shown an inherent conformational plasticity in Cpl-1 that accounts for the different relative position of these regions in the solution and crystal structures. Dimerization of Cpl-1 upon choline binding has been also visualised for the first time, and monomer-monomer interactions take place through the first CBR where a non-canonical choline binding site has now been identified. This mode of association seems to be independent of the absence or presence of the Cpl-1 catalytic module and reveals that the arrangement of the monomers differs from that previously found in the isolated CBM dimer of pneumococcal LytA amidase. In contrast, Pce displays the same modular disposition in the solution and crystal structures, and remains almost invariant upon choline binding. The present results suggest that protein dimerization and duplication of CBRs may be alternative but not equivalent ways of improving cell wall recognition by CBPs, since they provide different interaction geometries for choline residues present in (lipo)teichoic acids.

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Year:  2006        PMID: 17064729     DOI: 10.1016/j.jmb.2006.09.091

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  11 in total

1.  Mapping flexibility and the assembly switch of cell division protein FtsZ by computational and mutational approaches.

Authors:  Antonio J Martín-Galiano; Rubén M Buey; Marta Cabezas; José M Andreu
Journal:  J Biol Chem       Date:  2010-05-13       Impact factor: 5.157

2.  Cpl-7, a lysozyme encoded by a pneumococcal bacteriophage with a novel cell wall-binding motif.

Authors:  Noemí Bustamante; Nuria E Campillo; Ernesto García; Cristina Gallego; Benet Pera; Gregory P Diakun; José Luis Sáiz; Pedro García; J Fernando Díaz; Margarita Menéndez
Journal:  J Biol Chem       Date:  2010-08-18       Impact factor: 5.157

3.  Linker Editing of Pneumococcal Lysin ClyJ Conveys Improved Bactericidal Activity.

Authors:  Hang Yang; Dehua Luo; Irina Etobayeva; Xiaohong Li; Yujing Gong; Shujuan Wang; Qiong Li; Poshi Xu; Wen Yin; Jin He; Daniel C Nelson; Hongping Wei
Journal:  Antimicrob Agents Chemother       Date:  2020-01-27       Impact factor: 5.191

4.  Structure of the choline-binding domain of Spr1274 in Streptococcus pneumoniae.

Authors:  Zhenyi Zhang; Wenzhe Li; Cecile Frolet; Rui Bao; Anne Marie di Guilmi; Thierry Vernet; Yuxing Chen
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-07-21

5.  Structure and flexibility within proteins as identified through small angle X-ray scattering.

Authors:  Martin Pelikan; Greg L Hura; Michal Hammel
Journal:  Gen Physiol Biophys       Date:  2009-06       Impact factor: 1.512

6.  Analysis of PKR structure by small-angle scattering.

Authors:  Jennifer VanOudenhove; Eric Anderson; Susan Krueger; James L Cole
Journal:  J Mol Biol       Date:  2009-02-14       Impact factor: 5.469

7.  ClyJ Is a Novel Pneumococcal Chimeric Lysin with a Cysteine- and Histidine-Dependent Amidohydrolase/Peptidase Catalytic Domain.

Authors:  Hang Yang; Yujing Gong; Huaidong Zhang; Irina Etobayeva; Paulina Miernikiewicz; Dehua Luo; Xiaohong Li; Xiaoxu Zhang; Krystyna Dąbrowska; Daniel C Nelson; Jin He; Hongping Wei
Journal:  Antimicrob Agents Chemother       Date:  2019-03-27       Impact factor: 5.191

8.  Insights into the structure-function relationships of pneumococcal cell wall lysozymes, LytC and Cpl-1.

Authors:  Begoña Monterroso; José Luis Sáiz; Pedro García; José Luis García; Margarita Menéndez
Journal:  J Biol Chem       Date:  2008-07-30       Impact factor: 5.157

9.  A Choline-Recognizing Monomeric Lysin, ClyJ-3m, Shows Elevated Activity against Streptococcus pneumoniae.

Authors:  Dehua Luo; Li Huang; Vijay Singh Gondil; Wanli Zhou; Wan Yang; Minghui Jia; Shencai Hu; Jin He; Hang Yang; Hongping Wei
Journal:  Antimicrob Agents Chemother       Date:  2020-11-17       Impact factor: 5.191

Review 10.  Listeria monocytogenes surface proteins: from genome predictions to function.

Authors:  Hélène Bierne; Pascale Cossart
Journal:  Microbiol Mol Biol Rev       Date:  2007-06       Impact factor: 11.056

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