Literature DB >> 17063692

Fast agglomerative clustering using a k-nearest neighbor graph.

Pasi Fränti1, Olli Virmajoki, Ville Hautamäki.   

Abstract

We propose a fast agglomerative clustering method using an approximate nearest neighbor graph for reducing the number of distance calculations. The time complexity of the algorithm is improved from O(tauN2) to O(tauNlogN) at the cost of a slight increase in distortion; here, tau denotes the number of nearest neighbor updates required at each iteration. According to the experiments, a relatively small neighborhood size is sufficient to maintain the quality close to that of the full search.

Mesh:

Year:  2006        PMID: 17063692     DOI: 10.1109/TPAMI.2006.227

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  8 in total

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Authors:  Yunpeng Cai; Yijun Sun
Journal:  Nucleic Acids Res       Date:  2011-05-19       Impact factor: 16.971

3.  Clustering gene expression data with a penalized graph-based metric.

Authors:  Ariel E Bayá; Pablo M Granitto
Journal:  BMC Bioinformatics       Date:  2011-01-04       Impact factor: 3.169

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5.  Performance Analysis and Architecture of a Clustering Hybrid Algorithm Called FA+GA-DBSCAN Using Artificial Datasets.

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Journal:  Entropy (Basel)       Date:  2022-06-25       Impact factor: 2.738

6.  Efficient computation of k-Nearest Neighbour Graphs for large high-dimensional data sets on GPU clusters.

Authors:  Ali Dashti; Ivan Komarov; Roshan M D'Souza
Journal:  PLoS One       Date:  2013-09-23       Impact factor: 3.240

7.  Fast k-NNG construction with GPU-based quick multi-select.

Authors:  Ivan Komarov; Ali Dashti; Roshan M D'Souza
Journal:  PLoS One       Date:  2014-05-08       Impact factor: 3.240

8.  Density Peaks Clustering by Zero-Pointed Samples of Regional Group Borders.

Authors:  Lin Ding; Weihong Xu; Yuantao Chen
Journal:  Comput Intell Neurosci       Date:  2020-07-18
  8 in total

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