Literature DB >> 17050545

Calcium stiffens archaeal Rad51 recombinase from Methanococcus voltae for homologous recombination.

Xinguo Qian1, Yujiong He, Xinfeng Ma, Michel N Fodje, Pawel Grochulski, Yu Luo.   

Abstract

Archaeal RadA or Rad51 recombinases are close homologues of eukaryal Rad51 and DMC1. These and bacterial RecA orthologues play a key role in DNA repair by forming helical nucleoprotein filaments in which a hallmark strand exchange reaction between homologous DNA substrates occurs. Recent studies have discovered the stimulatory role by calcium on human and yeast recombinases. Here we report that the strand exchange activity but not the ATPase activity of an archaeal RadA/Rad51 recombinase from Methanococcus voltae (MvRadA) is also subject to calcium stimulation. Crystallized MvRadA filaments in the presence of CaCl(2) resemble that of the recently reported ATPase active form in the presence of an activating dose of KCl. At the ATPase center, one Ca(2+) ion takes the place of two K(+) ions in the K(+)-bound form. The terminal phosphate of the nonhydrolyzable ATP analogue is in a staggered conformation in the Ca(2+)-bound form. In comparison, an eclipsed conformation was seen in the K(+)-bound form. Despite the changes in the ATPase center, both forms harbor largely ordered L2 regions in essentially identical conformations. These data suggest a unified stimulation mechanism by potassium and calcium because of the existence of a conserved ATPase center promiscuous in binding cations.

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Year:  2006        PMID: 17050545     DOI: 10.1074/jbc.M607785200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  13 in total

1.  Canadian macromolecular crystallography facility: a suite of fully automated beamlines.

Authors:  Pawel Grochulski; Michel Fodje; Shaunivan Labiuk; James Gorin; Kathryn Janzen; Russ Berg
Journal:  J Struct Funct Genomics       Date:  2012-01-21

2.  RAD51 protein ATP cap regulates nucleoprotein filament stability.

Authors:  Ravindra Amunugama; Yujiong He; Smaranda Willcox; Robert A Forties; Kang-Sup Shim; Ralf Bundschuh; Yu Luo; Jack Griffith; Richard Fishel
Journal:  J Biol Chem       Date:  2012-01-24       Impact factor: 5.157

3.  The third exon of the budding yeast meiotic recombination gene HOP2 is required for calcium-dependent and recombinase Dmc1-specific stimulation of homologous strand assimilation.

Authors:  Yuen-Ling Chan; M Scott Brown; Daoming Qin; Naofumi Handa; Douglas K Bishop
Journal:  J Biol Chem       Date:  2014-05-05       Impact factor: 5.157

Review 4.  DNA strand exchange and RecA homologs in meiosis.

Authors:  M Scott Brown; Douglas K Bishop
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-12-04       Impact factor: 10.005

5.  Srs2 disassembles Rad51 filaments by a protein-protein interaction triggering ATP turnover and dissociation of Rad51 from DNA.

Authors:  Edwin Antony; Eric J Tomko; Qi Xiao; Lumir Krejci; Timothy M Lohman; Tom Ellenberger
Journal:  Mol Cell       Date:  2009-07-10       Impact factor: 17.970

6.  Molecular modeling and molecular dynamics simulations of recombinase Rad51.

Authors:  Yuichi Kokabu; Mitsunori Ikeguchi
Journal:  Biophys J       Date:  2013-04-02       Impact factor: 4.033

7.  Structure of a hexameric form of RadA recombinase from Methanococcus voltae.

Authors:  Liqin Du; Yu Luo
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-04-20

8.  Ca2+ improves organization of single-stranded DNA bases in human Rad51 filament, explaining stimulatory effect on gene recombination.

Authors:  Louise H Fornander; Karolin Frykholm; Anna Reymer; Axelle Renodon-Cornière; Masayuki Takahashi; Bengt Nordén
Journal:  Nucleic Acids Res       Date:  2012-02-22       Impact factor: 16.971

9.  Conservation of a conformational switch in RadA recombinase from Methanococcus maripaludis.

Authors:  Yang Li; Yujiong He; Yu Luo
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-05-15

10.  Structural and torsional properties of the RAD51-dsDNA nucleoprotein filament.

Authors:  Mina Lee; Jan Lipfert; Humberto Sanchez; Claire Wyman; Nynke H Dekker
Journal:  Nucleic Acids Res       Date:  2013-05-22       Impact factor: 16.971

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