Literature DB >> 17047029

Paleontological evidence to date the tree of life.

Michael J Benton1, Philip C J Donoghue.   

Abstract

The role of fossils in dating the tree of life has been misunderstood. Fossils can provide good "minimum" age estimates for branches in the tree, but "maximum" constraints on those ages are poorer. Current debates about which are the "best" fossil dates for calibration move to consideration of the most appropriate constraints on the ages of tree nodes. Because fossil-based dates are constraints, and because molecular evolution is not perfectly clock-like, analysts should use more rather than fewer dates, but there has to be a balance between many genes and few dates versus many dates and few genes. We provide "hard" minimum and "soft" maximum age constraints for 30 divergences among key genome model organisms; these should contribute to better understanding of the dating of the animal tree of life.

Mesh:

Year:  2006        PMID: 17047029     DOI: 10.1093/molbev/msl150

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  316 in total

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Authors:  S A Romanenko; P L Perelman; V A Trifonov; A S Graphodatsky
Journal:  Heredity (Edinb)       Date:  2011-11-16       Impact factor: 3.821

2.  Estimating the rate of adaptive molecular evolution when the evolutionary divergence between species is small.

Authors:  Peter D Keightley; Adam Eyre-Walker
Journal:  J Mol Evol       Date:  2012-02-12       Impact factor: 2.395

3.  A hierarchical Bayesian model for calibrating estimates of species divergence times.

Authors:  Tracy A Heath
Journal:  Syst Biol       Date:  2012-02-14       Impact factor: 15.683

Review 4.  Variation in the mutation rate across mammalian genomes.

Authors:  Alan Hodgkinson; Adam Eyre-Walker
Journal:  Nat Rev Genet       Date:  2011-10-04       Impact factor: 53.242

5.  Modular evolution of PGC-1alpha in vertebrates.

Authors:  Christophe M R LeMoine; Stephen C Lougheed; Christopher D Moyes
Journal:  J Mol Evol       Date:  2010-05-05       Impact factor: 2.395

6.  Dating primate divergences through an integrated analysis of palaeontological and molecular data.

Authors:  Richard D Wilkinson; Michael E Steiper; Christophe Soligo; Robert D Martin; Ziheng Yang; Simon Tavaré
Journal:  Syst Biol       Date:  2010-11-04       Impact factor: 15.683

7.  Characterization of hemocyanin from the peacock mantis shrimp Odontodactylus scyllarus (Malacostraca: Hoplocarida).

Authors:  Samantha Scherbaum; Beyhan Ertas; Wolfgang Gebauer; Thorsten Burmester
Journal:  J Comp Physiol B       Date:  2010-07-17       Impact factor: 2.200

8.  Primate phylogenetic relationships and divergence dates inferred from complete mitochondrial genomes.

Authors:  Luca Pozzi; Jason A Hodgson; Andrew S Burrell; Kirstin N Sterner; Ryan L Raaum; Todd R Disotell
Journal:  Mol Phylogenet Evol       Date:  2014-02-28       Impact factor: 4.286

9.  The origin and early evolution of Sauria: reassessing the permian Saurian fossil record and the timing of the crocodile-lizard divergence.

Authors:  Martín D Ezcurra; Torsten M Scheyer; Richard J Butler
Journal:  PLoS One       Date:  2014-02-27       Impact factor: 3.240

10.  Evolutionary rate and gene expression across different brain regions.

Authors:  Tamir Tuller; Martin Kupiec; Eytan Ruppin
Journal:  Genome Biol       Date:  2008       Impact factor: 13.583

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