Literature DB >> 17046089

A DNA chip-based spoligotyping method for the strain identification of Mycobacterium tuberculosis isolates.

Eun Ju Song1, Hae Jin Jeong, Sun Min Lee, Cheol Min Kim, Eun Sil Song, Young Kil Park, Gill-Han Bai, Eun Yup Lee, Chulhun L Chang.   

Abstract

The clinical efficacy of a spoligotyping method for discriminating Mycobacterium tuberculosis strains was evaluated. Among the strains other than Beijing or Beijing like family, 30 different spoligotypes out of 39 strains were produced, which included 4 strains not having IS6110 sequence. The oligonucleotide chip-based spoligotyping technique is useful for early screening and detection of clonal proximity of M. tuberculosis isolates.

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Year:  2006        PMID: 17046089     DOI: 10.1016/j.mimet.2006.09.005

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  7 in total

1.  Spoligotyping of Mycobacterium tuberculosis Complex Isolates by Use of Ligation-Based Amplification and Melting Curve Analysis.

Authors:  Xiaohong Zeng; Hui Li; Rongrong Zheng; Natalia Kurepina; Barry N Kreiswirth; Xilin Zhao; Ye Xu; Qingge Li
Journal:  J Clin Microbiol       Date:  2016-06-22       Impact factor: 5.948

2.  Detection of Mycobacterium bovis and Mycobacterium tuberculosis from Cattle: Possible Public Health Relevance.

Authors:  Aneesh Thakur; Mandeep Sharma; Vipin C Katoch; Prasenjit Dhar; R C Katoch
Journal:  Indian J Microbiol       Date:  2011-08-19       Impact factor: 2.461

3.  IS6110-restriction fragment length polymorphism and spoligotyping analysis of Mycobacterium tuberculosis clinical isolates for investigating epidemiologic distribution in Korea.

Authors:  Go Eun Choi; Mi Hee Jang; Eun Ju Song; Seok Hoon Jeong; Jae-Seok Kim; Wee Gyo Lee; Young Uh; Kyoung Ho Roh; Hye Soo Lee; Jong Hee Shin; Nam Hee Ryoo; Young Ree Kim; Joseph Jeong; Jee Hee Kim; Sun Min Lee; Jongyoun Yi; Sang Hyun Hwang; Hyung Hoi Kim; Eun Yup Lee; Chulhun L Chang; Moon-Bum Kim; Yeong Dae Kim
Journal:  J Korean Med Sci       Date:  2010-11-24       Impact factor: 2.153

4.  Spoligotyping analysis of Mycobacterium tuberculosis in Khyber Pakhtunkhwa area, Pakistan.

Authors:  Sajid Ali; Muhammad Tahir Khan; Khan Anwar Sheed; Muhammad Mumtaz Khan; Fariha Hasan
Journal:  Infect Drug Resist       Date:  2019-05-20       Impact factor: 4.003

5.  Evaluation of biochip system in determining isoniazid and rifampicin resistances of mycobacterium tuberculosis in sputum samples.

Authors:  Wei Lu; Cheng Chen; Yan Shao; Jinyan Shi; Chongqiao Zhong; Dandan Yang; Honghuan Song; Guoli Li; Xiaoyan Ding; Hong Peng; Linyang Zhu; Yang Zhou; Limei Zhu
Journal:  PLoS One       Date:  2012-12-28       Impact factor: 3.240

6.  SpoTyping: fast and accurate in silico Mycobacterium spoligotyping from sequence reads.

Authors:  Eryu Xia; Yik-Ying Teo; Rick Twee-Hee Ong
Journal:  Genome Med       Date:  2016-02-17       Impact factor: 11.117

Review 7.  Mycobacterium bovis: From Genotyping to Genome Sequencing.

Authors:  Ana M S Guimaraes; Cristina K Zimpel
Journal:  Microorganisms       Date:  2020-05-03
  7 in total

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