Literature DB >> 17045425

Structural divergence and adaptive evolution in mammalian cytochromes P450 2C.

Rute R da Fonseca1, Agostinho Antunes, André Melo, Maria João Ramos.   

Abstract

Cytochromes P450 (CYPs) comprise a superfamily of enzymes involved in various physiological functions, including the metabolism of drugs and carcinogenic compounds present in food, making them of great importance for human health. The possibility that CYPs could be broadening or changing substrate specificity in accordance to the high diversity of xenobiotics compounds environmentally available suggests that their metabolic function could be under adaptive evolution. We evaluated the existence of functional divergence and signatures of selection on mammalian genes from the drug-metabolizing CYP2 family. Thirteen of the sites found to be functionally divergent and the eight found to be under strong positive selection occurred in important functional domains, namely on the substrate entrance channel and within the active site. Our results provide insight into CYPs evolution and the role of molecular adaptation in enzyme substrate-specificity diversification.

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Year:  2006        PMID: 17045425     DOI: 10.1016/j.gene.2006.08.017

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  12 in total

1.  Molecular phylogeny, long-term evolution, and functional divergence of flavin-containing monooxygenases.

Authors:  Da Cheng Hao; Shi Lin Chen; Jun Mu; Pei Gen Xiao
Journal:  Genetica       Date:  2009-07-05       Impact factor: 1.082

2.  Molecular evolution and the role of oxidative stress in the expansion and functional diversification of cytosolic glutathione transferases.

Authors:  Rute R da Fonseca; Warren E Johnson; Stephen J O'Brien; Vítor Vasconcelos; Agostinho Antunes
Journal:  BMC Evol Biol       Date:  2010-09-15       Impact factor: 3.260

3.  Structural and functional implications of positive selection at the primate angiogenin gene.

Authors:  Daniel S Osorio; Agostinho Antunes; Maria J Ramos
Journal:  BMC Evol Biol       Date:  2007-09-20       Impact factor: 3.260

4.  Evolution of substrate recognition sites (SRSs) in cytochromes P450 from Apiaceae exemplified by the CYP71AJ subfamily.

Authors:  Bjørn Dueholm; Célia Krieger; Damian Drew; Alexandre Olry; Tsunashi Kamo; Olivier Taboureau; Corinna Weitzel; Frédéric Bourgaud; Alain Hehn; Henrik Toft Simonsen
Journal:  BMC Evol Biol       Date:  2015-06-26       Impact factor: 3.260

5.  Evolutionary genomics and adaptive evolution of the Hedgehog gene family (Shh, Ihh and Dhh) in vertebrates.

Authors:  Joana Pereira; Warren E Johnson; Stephen J O'Brien; Erich D Jarvis; Guojie Zhang; M Thomas P Gilbert; Vitor Vasconcelos; Agostinho Antunes
Journal:  PLoS One       Date:  2014-12-30       Impact factor: 3.240

6.  Rapid birth-and-death evolution of the xenobiotic metabolizing NAT gene family in vertebrates with evidence of adaptive selection.

Authors:  Audrey Sabbagh; Julie Marin; Charlotte Veyssière; Emilie Lecompte; Sotiria Boukouvala; Estella S Poloni; Pierre Darlu; Brigitte Crouau-Roy
Journal:  BMC Evol Biol       Date:  2013-03-07       Impact factor: 3.260

7.  Gathering computational genomics and proteomics to unravel adaptive evolution.

Authors:  Agostinho Antunes; Maria João Ramos
Journal:  Evol Bioinform Online       Date:  2007-09-06       Impact factor: 1.625

8.  Functional requirements driving the gene duplication in 12 Drosophila species.

Authors:  Yan Zhong; Yanxiao Jia; Yang Gao; Dacheng Tian; Sihai Yang; Xiaohui Zhang
Journal:  BMC Genomics       Date:  2013-08-15       Impact factor: 3.969

9.  Directional Darwinian Selection in proteins.

Authors:  David A McClellan
Journal:  BMC Bioinformatics       Date:  2013-10-01       Impact factor: 3.169

10.  Whole-Genome Identification, Phylogeny, and Evolution of the Cytochrome P450 Family 2 (CYP2) Subfamilies in Birds.

Authors:  Daniela Almeida; Emanuel Maldonado; Imran Khan; Liliana Silva; M Thomas P Gilbert; Guojie Zhang; Erich D Jarvis; Stephen J O'Brien; Warren E Johnson; Agostinho Antunes
Journal:  Genome Biol Evol       Date:  2016-04-13       Impact factor: 3.416

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