Literature DB >> 17044712

The lipidated membrane anchor of full length N-Ras protein shows an extensive dynamics as revealed by solid-state NMR spectroscopy.

Guido Reuther1, Kui-Thong Tan, Alexander Vogel, Christine Nowak, Klaus Arnold, Jürgen Kuhlmann, Herbert Waldmann, Daniel Huster.   

Abstract

Many proteins involved in signal transduction are equipped with covalently attached lipid chains providing a hydrophobic anchor targeting these molecules to membranes. Despite the considerable biological significance of this membrane binding mechanism for 5-10% of all cellular proteins, to date very little is known about structural and dynamical features of lipidated membrane binding domains. Here we report the first comprehensive study of the molecular dynamics of the C-terminus of membrane-associated full-length lipidated Ras protein determined by solid-state NMR. Fully functional lipid-modified N-Ras protein was obtained by chemical-biological synthesis ligating the expressed water soluble N-terminus with a chemically synthesized (2)H or (13)C labeled lipidated heptapeptide. Dynamical parameters for the lipid chain modification at Cys 181 were determined from static (2)H NMR order parameter and relaxation measurements. Order parameters describing the amplitude of motion in the protein backbone and the side chain were determined from site-specific measurements of (1)H-(13)C dipolar couplings for all seven amino acids in the membrane anchor of Ras. Finally, the correlation times of motion were determined from temperature dependent relaxation time measurements and analyzed using a modified Lipari Szabo approach. Overall, the C-terminus of Ras shows a versatile dynamics with segmental fluctuations and axially symmetric overall motions on the membrane surface. In particular, the lipid chain modifications are highly flexible in the membrane.

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Year:  2006        PMID: 17044712     DOI: 10.1021/ja063635s

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  24 in total

Review 1.  Ras nanoclusters: molecular structure and assembly.

Authors:  Daniel Abankwa; Alemayehu A Gorfe; John F Hancock
Journal:  Semin Cell Dev Biol       Date:  2007-08-19       Impact factor: 7.727

2.  The presence of membranes or micelles induces structural changes of the myristoylated guanylate-cyclase activating protein-2.

Authors:  Stephan Theisgen; Lars Thomas; Thomas Schröder; Christian Lange; Michael Kovermann; Jochen Balbach; Daniel Huster
Journal:  Eur Biophys J       Date:  2011-02-17       Impact factor: 1.733

3.  Supramolecular structure of membrane-associated polypeptides by combining solid-state NMR and molecular dynamics simulations.

Authors:  Markus Weingarth; Christian Ader; Adrien S J Melquiond; Deepak Nand; Olaf Pongs; Stefan Becker; Alexandre M J J Bonvin; Marc Baldus
Journal:  Biophys J       Date:  2012-07-03       Impact factor: 4.033

4.  Influence of the lipid anchor motif of N-ras on the interaction with lipid membranes: a surface plasmon resonance study.

Authors:  Andrea Gohlke; Gemma Triola; Herbert Waldmann; Roland Winter
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

5.  Segmental isotopic labeling of HIV-1 capsid protein assemblies for solid state NMR.

Authors:  Sebanti Gupta; Robert Tycko
Journal:  J Biomol NMR       Date:  2018-01-18       Impact factor: 2.835

Review 6.  Lessons from computer simulations of Ras proteins in solution and in membrane.

Authors:  Priyanka Prakash; Alemayehu A Gorfe
Journal:  Biochim Biophys Acta       Date:  2013-07-30

7.  Segregation of negatively charged phospholipids by the polycationic and farnesylated membrane anchor of Kras.

Authors:  Lorant Janosi; Alemayehu A Gorfe
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

Review 8.  Structure and mechanism of beta-hairpin antimicrobial peptides in lipid bilayers from solid-state NMR spectroscopy.

Authors:  Ming Tang; Mei Hong
Journal:  Mol Biosyst       Date:  2009-01-27

9.  Effects of amantadine on the dynamics of membrane-bound influenza A M2 transmembrane peptide studied by NMR relaxation.

Authors:  Sarah D Cady; Mei Hong
Journal:  J Biomol NMR       Date:  2009-07-25       Impact factor: 2.835

10.  Arginine dynamics in a membrane-bound cationic beta-hairpin peptide from solid-state NMR.

Authors:  Ming Tang; Alan J Waring; Mei Hong
Journal:  Chembiochem       Date:  2008-06-16       Impact factor: 3.164

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