Literature DB >> 17033785

A comparative linkage map of oilseed rape and its use for QTL analysis of seed oil and erucic acid content.

D Qiu1, C Morgan, J Shi, Y Long, J Liu, R Li, X Zhuang, Y Wang, X Tan, E Dietrich, T Weihmann, C Everett, S Vanstraelen, P Beckett, F Fraser, M Trick, S Barnes, J Wilmer, R Schmidt, J Li, D Li, J Meng, I Bancroft.   

Abstract

We have developed a new DH mapping population for oilseed rape, named TNDH, using genetically and phenotypically diverse parental lines. We used the population in the construction of a high stringency genetic linkage map, consisting of 277 loci, for use in quantitative genetic analysis. A proportion of the markers had been used previously in the construction of linkage maps for Brassica species, thus permitting the alignment of maps. The map includes 68 newly developed Sequence Tagged Site (STS) markers targeted to the homologues of defined genes of A. thaliana. The use of these markers permits the alignment of our linkage map with the A. thaliana genome sequence. An additional 74 loci (31 newly developed STS markers and 43 loci defined by SSR and RFLP markers that had previously been used in published linkage maps) were added to the map. These markers increased the resolution of alignment of the newly constructed linkage map with existing Brassica linkage maps and the A. thaliana genome sequence. We conducted field trials with the TNDH population at two sites, and over 2 years, and identified reproducible QTL for seed oil content and erucic acid content. The results provide new insights into the genetic control of seed oil and erucic acid content in oilseed rape, and demonstrate the utility of the linkage map and population.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 17033785     DOI: 10.1007/s00122-006-0411-2

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  33 in total

1.  RFLP mapping of Brassica napus using doubled haploid lines.

Authors:  M E Ferreira; P H Williams; T C Osborn
Journal:  Theor Appl Genet       Date:  1994-11       Impact factor: 5.699

2.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

3.  Differences in DNA methylation patterns are detectable during the dimorphic transition of fungi by amplification of restriction polymorphisms.

Authors:  G E Reyna-López; J Simpson; J Ruiz-Herrera
Journal:  Mol Gen Genet       Date:  1997-02-27

4.  A jojoba beta-Ketoacyl-CoA synthase cDNA complements the canola fatty acid elongation mutation in transgenic plants.

Authors:  M W Lassner; K Lardizabal; J G Metz
Journal:  Plant Cell       Date:  1996-02       Impact factor: 11.277

5.  Isolation and characterization of microsatellites in Brassica rapa L.

Authors:  K. Suwabe; H. Iketani; T. Nunome; T. Kage; M. Hirai
Journal:  Theor Appl Genet       Date:  2002-04-05       Impact factor: 5.699

6.  Frequent nonreciprocal translocations in the amphidiploid genome of oilseed rape (Brassica napus).

Authors:  A G Sharpe; I A Parkin; D J Keith; D J Lydiate
Journal:  Genome       Date:  1995-12       Impact factor: 2.166

7.  Towards developing intervarietal substitution lines in Brassica napus using marker-assisted selection.

Authors:  P M Howell; D J Lydiate; D F Marshall
Journal:  Genome       Date:  1996-04       Impact factor: 2.166

8.  Identification of polymorphic, conserved simple sequence repeats (SSRs) in cultivated Brassica species.

Authors:  A K Szewc-McFadden; S Kresovich; S M Bliek; S E Mitchell; J R McFerson
Journal:  Theor Appl Genet       Date:  1996-09       Impact factor: 5.699

9.  QTL analysis of an intervarietal set of substitution lines in Brassica napus: (i) Seed oil content and fatty acid composition.

Authors:  M J Burns; S R Barnes; J G Bowman; M H E Clarke; C P Werner; M J Kearsey
Journal:  Heredity (Edinb)       Date:  2003-01       Impact factor: 3.821

10.  Isolation of EMS-induced mutants in Arabidopsis altered in seed fatty acid composition.

Authors:  D W James; H K Dooner
Journal:  Theor Appl Genet       Date:  1990-08       Impact factor: 5.699

View more
  125 in total

1.  A genetic linkage map of Brassica carinata constructed with a doubled haploid population.

Authors:  Shaomin Guo; Jun Zou; Ruiyan Li; Yan Long; Sheng Chen; Jinling Meng
Journal:  Theor Appl Genet       Date:  2012-06-06       Impact factor: 5.699

2.  Quantitative trait loci involved in regulating seed oil composition in Arabidopsis thaliana and their evolutionary implications.

Authors:  Anushree Sanyal; C Randal Linder
Journal:  Theor Appl Genet       Date:  2011-11-10       Impact factor: 5.699

3.  Identification, fine mapping and characterisation of a dwarf mutant (bnaC.dwf) in Brassica napus.

Authors:  Xinhua Zeng; Lixia Zhu; Yanli Chen; Liping Qi; Yuanyuan Pu; Jing Wen; Bin Yi; Jinxiong Shen; Chaozhi Ma; Jinxing Tu; Tingdong Fu
Journal:  Theor Appl Genet       Date:  2010-09-28       Impact factor: 5.699

4.  Unraveling the complex trait of crop yield with quantitative trait loci mapping in Brassica napus.

Authors:  Jiaqin Shi; Ruiyuan Li; Dan Qiu; Congcong Jiang; Yan Long; Colin Morgan; Ian Bancroft; Jianyi Zhao; Jinling Meng
Journal:  Genetics       Date:  2009-05-04       Impact factor: 4.562

5.  Three-point appraisal of genetic linkage maps.

Authors:  W R Gilks; S J Welham; J Wang; S J Clark; G J King
Journal:  Theor Appl Genet       Date:  2012-06-29       Impact factor: 5.699

6.  Dissecting the genetic architecture of agronomic traits in multiple segregating populations in rapeseed (Brassica napus L.).

Authors:  Tobias Würschum; Wenxin Liu; Hans Peter Maurer; Stefan Abel; Jochen C Reif
Journal:  Theor Appl Genet       Date:  2011-09-06       Impact factor: 5.699

7.  Epigenetic QTL mapping in Brassica napus.

Authors:  Yan Long; Wei Xia; Ruiyuan Li; Jing Wang; Mingqin Shao; Ji Feng; Graham J King; Jinling Meng
Journal:  Genetics       Date:  2011-09-02       Impact factor: 4.562

8.  Novel insights into seed fatty acid synthesis and modification pathways from genetic diversity and quantitative trait Loci analysis of the Brassica C genome.

Authors:  Guy C Barker; Tony R Larson; Ian A Graham; James R Lynn; Graham J King
Journal:  Plant Physiol       Date:  2007-06-15       Impact factor: 8.340

9.  Comparative analysis between homoeologous genome segments of Brassica napus and its progenitor species reveals extensive sequence-level divergence.

Authors:  Foo Cheung; Martin Trick; Nizar Drou; Yong Pyo Lim; Jee-Young Park; Soo-Jin Kwon; Jin-A Kim; Rod Scott; J Chris Pires; Andrew H Paterson; Chris Town; Ian Bancroft
Journal:  Plant Cell       Date:  2009-07-14       Impact factor: 11.277

10.  A triallelic genetic male sterility locus in Brassica napus: an integrative strategy for its physical mapping and possible local chromosome evolution around it.

Authors:  Wei Lu; Jun Liu; Qiang Xin; Lili Wan; Dengfeng Hong; Guangsheng Yang
Journal:  Ann Bot       Date:  2012-12-13       Impact factor: 4.357

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.