Literature DB >> 17024841

Variational Bayes inference of spatial mixture models for segmentation.

Mark W Woolrich1, Timothy E Behrens.   

Abstract

Mixture models are commonly used in the statistical segmentation of images. For example, they can be used for the segmentation of structural medical images into different matter types, or of statistical parametric maps into activating and nonactivating brain regions in functional imaging. Spatial mixture models have been developed to augment histogram information with spatial regularization using Markov random fields (MRFs). In previous work, an approximate model was developed to allow adaptive determination of the parameter controlling the strength of spatial regularization. Inference was performed using Markov Chain Monte Carlo (MCMC) sampling. However, this approach is prohibitively slow for large datasets. In this work, a more efficient inference approach is presented. This combines a variational Bayes approximation with a second-order Taylor expansion of the components of the posterior distribution, which would otherwise be intractable to Variational Bayes. This provides inference on fully adaptive spatial mixture models an order of magnitude faster than MCMC. We examine the behavior of this approach when applied to artificial data with different spatial characteristics, and to functional magnetic resonance imaging statistical parametric maps.

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Year:  2006        PMID: 17024841     DOI: 10.1109/tmi.2006.880682

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  13 in total

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3.  Brain anatomical structure segmentation by hybrid discriminative/generative models.

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5.  Bayesian scalar-on-image regression with application to association between intracranial DTI and cognitive outcomes.

Authors:  Lei Huang; Jeff Goldsmith; Philip T Reiss; Daniel S Reich; Ciprian M Crainiceanu
Journal:  Neuroimage       Date:  2013-06-17       Impact factor: 6.556

6.  LoAd: a locally adaptive cortical segmentation algorithm.

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Journal:  Neuroimage       Date:  2011-02-23       Impact factor: 6.556

7.  Three-dimensional coupled-object segmentation using symmetry and tissue type information.

Authors:  Payam B Bijari; Alireza Akhondi-Asl; Hamid Soltanian-Zadeh
Journal:  Comput Med Imaging Graph       Date:  2009-11-22       Impact factor: 4.790

8.  Graph-partitioned spatial priors for functional magnetic resonance images.

Authors:  L M Harrison; W Penny; G Flandin; C C Ruff; N Weiskopf; K J Friston
Journal:  Neuroimage       Date:  2008-08-23       Impact factor: 6.556

9.  Robust reproducible resting state networks in the awake rodent brain.

Authors:  Lino Becerra; Gautam Pendse; Pei-Ching Chang; James Bishop; David Borsook
Journal:  PLoS One       Date:  2011-10-18       Impact factor: 3.240

10.  Objective Bayesian fMRI analysis-a pilot study in different clinical environments.

Authors:  Joerg Magerkurth; Laura Mancini; William Penny; Guillaume Flandin; John Ashburner; Caroline Micallef; Enrico De Vita; Pankaj Daga; Mark J White; Craig Buckley; Adam K Yamamoto; Sebastien Ourselin; Tarek Yousry; John S Thornton; Nikolaus Weiskopf
Journal:  Front Neurosci       Date:  2015-05-12       Impact factor: 4.677

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