Literature DB >> 17023429

BRG1 chromatin remodeling activity is required for efficient chromatin binding by repressor element 1-silencing transcription factor (REST) and facilitates REST-mediated repression.

Lezanne Ooi1, Nikolai D Belyaev, Katsuhide Miyake, Ian C Wood, Noel J Buckley.   

Abstract

Chromatin remodeling enzymes such as SWI/SNF use the hydrolysis of ATP to power the movement of nucleosomes with respect to DNA. BRG1, one of the ATPases of the SWI/SNF complex, can be recruited by both activators and repressors, although the precise role of BRG1 in mechanisms of repression has thus far remained unclear. One transcription factor that recruits BRG1 as a corepressor is the repressor element 1-silencing transcription factor (REST). Here we address for the first time the mechanism of BRG1 activity in gene repression. We found that BRG1 enhanced REST-mediated repression at some REST target genes by increasing the interaction of REST with the local chromatin at its binding sites. Furthermore, REST-chromatin interactions, mediated by BRG1, were enhanced following an increase in histone acetylation in a manner dependent on the BRG1 bromodomain. Our data suggest that BRG1 facilitates REST repression by increasing the interaction between REST and chromatin. Such a mechanism may be applicable to other transcriptional repressors that utilize BRG1.

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Year:  2006        PMID: 17023429      PMCID: PMC1820614          DOI: 10.1074/jbc.M605370200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  48 in total

1.  Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes.

Authors:  A H Hassan; K E Neely; J L Workman
Journal:  Cell       Date:  2001-03-23       Impact factor: 41.582

Review 2.  ATP-dependent nucleosome remodeling complexes: enzymes tailored to deal with chromatin.

Authors:  Saïd Sif
Journal:  J Cell Biochem       Date:  2004-04-15       Impact factor: 4.429

3.  Transcriptional repression by REST: recruitment of Sin3A and histone deacetylase to neuronal genes.

Authors:  Y Huang; S J Myers; R Dingledine
Journal:  Nat Neurosci       Date:  1999-10       Impact factor: 24.884

4.  Brg1 is required for murine neural stem cell maintenance and gliogenesis.

Authors:  Steven Matsumoto; Fatima Banine; Jaime Struve; Rubing Xing; Chris Adams; Ying Liu; Daniel Metzger; Pierre Chambon; Mahendra S Rao; Larry S Sherman
Journal:  Dev Biol       Date:  2005-12-02       Impact factor: 3.582

5.  The neuronal repressor REST/NRSF is an essential regulator in medulloblastoma cells.

Authors:  P Lawinger; R Venugopal; Z S Guo; A Immaneni; D Sengupta; W Lu; L Rastelli; A Marin Dias Carneiro; V Levin; G N Fuller; Y Echelard; S Majumder
Journal:  Nat Med       Date:  2000-07       Impact factor: 53.440

6.  The structural basis for the recognition of acetylated histone H4 by the bromodomain of histone acetyltransferase gcn5p.

Authors:  D J Owen; P Ornaghi; J C Yang; N Lowe; P R Evans; P Ballario; D Neuhaus; P Filetici; A A Travers
Journal:  EMBO J       Date:  2000-11-15       Impact factor: 11.598

7.  Chromatin-dependent E1A activity modulates NF-kappaB RelA-mediated repression of glucocorticoid receptor-dependent transcription.

Authors:  Barbara A Burkhart; Pratibha B Hebbar; Kevin W Trotter; Trevor K Archer
Journal:  J Biol Chem       Date:  2004-11-19       Impact factor: 5.157

8.  The neuron-restrictive silencer factor (NRSF): a coordinate repressor of multiple neuron-specific genes.

Authors:  C J Schoenherr; D J Anderson
Journal:  Science       Date:  1995-03-03       Impact factor: 47.728

9.  Genome-wide analysis of cAMP-response element binding protein occupancy, phosphorylation, and target gene activation in human tissues.

Authors:  Xinmin Zhang; Duncan T Odom; Seung-Hoi Koo; Michael D Conkright; Gianluca Canettieri; Jennifer Best; Huaming Chen; Richard Jenner; Elizabeth Herbolsheimer; Elizabeth Jacobsen; Shilpa Kadam; Joseph R Ecker; Beverly Emerson; John B Hogenesch; Terry Unterman; Richard A Young; Marc Montminy
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-07       Impact factor: 11.205

10.  Distinct RE-1 silencing transcription factor-containing complexes interact with different target genes.

Authors:  Nikolai D Belyaev; Ian C Wood; Alexander W Bruce; Miyoko Street; Jean-Baptiste Trinh; Noel J Buckley
Journal:  J Biol Chem       Date:  2003-10-15       Impact factor: 5.157

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  41 in total

1.  Hormone-induced repression of genes requires BRG1-mediated H1.2 deposition at target promoters.

Authors:  Ana Silvina Nacht; Andy Pohl; Roser Zaurin; Daniel Soronellas; Javier Quilez; Priyanka Sharma; Roni H Wright; Miguel Beato; Guillermo P Vicent
Journal:  EMBO J       Date:  2016-07-07       Impact factor: 11.598

Review 2.  Chromatin remodeling and cancer, Part II: ATP-dependent chromatin remodeling.

Authors:  Gang G Wang; C David Allis; Ping Chi
Journal:  Trends Mol Med       Date:  2007-09-05       Impact factor: 11.951

3.  BRD7, a novel PBAF-specific SWI/SNF subunit, is required for target gene activation and repression in embryonic stem cells.

Authors:  Matthias D Kaeser; Aaron Aslanian; Meng-Qiu Dong; John R Yates; Beverly M Emerson
Journal:  J Biol Chem       Date:  2008-09-22       Impact factor: 5.157

4.  Coassembly of REST and its cofactors at sites of gene repression in embryonic stem cells.

Authors:  Hong-Bing Yu; Rory Johnson; Galih Kunarso; Lawrence W Stanton
Journal:  Genome Res       Date:  2011-06-01       Impact factor: 9.043

5.  TDP-43 is a transcriptional repressor: the testis-specific mouse acrv1 gene is a TDP-43 target in vivo.

Authors:  Avin S Lalmansingh; Craig J Urekar; Prabhakara P Reddi
Journal:  J Biol Chem       Date:  2011-01-20       Impact factor: 5.157

Review 6.  The emerging field of epigenetics in neurodegeneration and neuroprotection.

Authors:  Jee-Yeon Hwang; Kelly A Aromolaran; R Suzanne Zukin
Journal:  Nat Rev Neurosci       Date:  2017-05-18       Impact factor: 34.870

7.  Profiling RE1/REST-mediated histone modifications in the human genome.

Authors:  Deyou Zheng; Keji Zhao; Mark F Mehler
Journal:  Genome Biol       Date:  2009-01-27       Impact factor: 13.583

8.  The HDAC3-SMARCA4-miR-27a axis promotes expression of the PAX3:FOXO1 fusion oncogene in rhabdomyosarcoma.

Authors:  Narendra Bharathy; Noah E Berlow; Eric Wang; Jinu Abraham; Teagan P Settelmeyer; Jody E Hooper; Matthew N Svalina; Yoshihiro Ishikawa; Keith Zientek; Zia Bajwa; Martin W Goros; Brian S Hernandez; Johannes E Wolff; Michelle A Rudek; Linping Xu; Nicole M Anders; Ranadip Pal; Alexandria P Harrold; Angela M Davies; Arya Ashok; Darnell Bushby; Maria Mancini; Christopher Noakes; Neal C Goodwin; Peter Ordentlich; James Keck; Douglas S Hawkins; Erin R Rudzinski; Bishwanath Chatterjee; Hans Peter Bächinger; Frederic G Barr; Jennifer Liddle; Benjamin A Garcia; Atiya Mansoor; Theodore J Perkins; Christopher R Vakoc; Joel E Michalek; Charles Keller
Journal:  Sci Signal       Date:  2018-11-20       Impact factor: 8.192

Review 9.  ATP-dependent chromatin remodeling in neural development.

Authors:  Andrew S Yoo; Gerald R Crabtree
Journal:  Curr Opin Neurobiol       Date:  2009-05-11       Impact factor: 6.627

Review 10.  Transcriptional regulation of neuronal differentiation: the epigenetic layer of complexity.

Authors:  Mary E Hamby; Volkan Coskun; Yi E Sun
Journal:  Biochim Biophys Acta       Date:  2008-07-28
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