Literature DB >> 19442513

ATP-dependent chromatin remodeling in neural development.

Andrew S Yoo1, Gerald R Crabtree.   

Abstract

Recent advances have revealed that modification of chromatin structure is an important determinant of cell fate and function. DNA methylation and covalent modifications of histone tails contribute to changes in chromatin architectures, either enhancing or repressing gene expression. Another mechanism underlying the modification of chromatin structure relies on the activity of the SWI/SNF-related ATP-dependent chromatin remodeling complexes that control the accessibility of DNA sequences to transcription factors. There is increasing evidence that ATP-dependent chromatin remodeling complexes based on the alternative DNA-dependent ATPases, Brg1 and Brm, plays essential roles during neural development in both vertebrates and invertebrates. This remodeling complex has dedicated functions at different stages of neural development that appear to arise by combinatorial assembly of its subunits.

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Year:  2009        PMID: 19442513      PMCID: PMC2756292          DOI: 10.1016/j.conb.2009.04.006

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN: 0959-4388            Impact factor:   6.627


  52 in total

1.  Notch signaling controls cell fate specification along the dorsoventral axis of the Drosophila gut.

Authors:  Bernhard Fuss; Michael Hoch
Journal:  Curr Biol       Date:  2002-02-05       Impact factor: 10.834

2.  Corepressor-dependent silencing of chromosomal regions encoding neuronal genes.

Authors:  Victoria V Lunyak; Robert Burgess; Gratien G Prefontaine; Charles Nelson; Sing-Hoi Sze; Josh Chenoweth; Phillip Schwartz; Pavel A Pevzner; Christopher Glass; Gail Mandel; Michael G Rosenfeld
Journal:  Science       Date:  2002-10-24       Impact factor: 47.728

3.  Genome-wide analysis of repressor element 1 silencing transcription factor/neuron-restrictive silencing factor (REST/NRSF) target genes.

Authors:  Alexander W Bruce; Ian J Donaldson; Ian C Wood; Sally A Yerbury; Michael I Sadowski; Michael Chapman; Berthold Göttgens; Noel J Buckley
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-06       Impact factor: 11.205

4.  A Brg1 null mutation in the mouse reveals functional differences among mammalian SWI/SNF complexes.

Authors:  S Bultman; T Gebuhr; D Yee; C La Mantia; J Nicholson; A Gilliam; F Randazzo; D Metzger; P Chambon; G Crabtree; T Magnuson
Journal:  Mol Cell       Date:  2000-12       Impact factor: 17.970

Review 5.  Nuclear actin and actin-related proteins in chromatin remodeling.

Authors:  Ivan A Olave; Samara L Reck-Peterson; Gerald R Crabtree
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

6.  Srg3, a mouse homolog of yeast SWI3, is essential for early embryogenesis and involved in brain development.

Authors:  J K Kim; S O Huh; H Choi; K S Lee; D Shin; C Lee; J S Nam; H Kim; H Chung; H W Lee; S D Park; R H Seong
Journal:  Mol Cell Biol       Date:  2001-11       Impact factor: 4.272

7.  Activity-dependent neuroprotective protein: a novel gene essential for brain formation.

Authors:  Albert Pinhasov; Shmuel Mandel; Arkady Torchinsky; Eliezer Giladi; Zipora Pittel; Andrew M Goldsweig; Stephen J Servoss; Douglas E Brenneman; Illana Gozes
Journal:  Brain Res Dev Brain Res       Date:  2003-08-12

8.  SOX2 functions to maintain neural progenitor identity.

Authors:  Victoria Graham; Jane Khudyakov; Pamela Ellis; Larysa Pevny
Journal:  Neuron       Date:  2003-08-28       Impact factor: 17.173

9.  lin-35/Rb cooperates with the SWI/SNF complex to control Caenorhabditis elegans larval development.

Authors:  Mingxue Cui; David S Fay; Min Han
Journal:  Genetics       Date:  2004-07       Impact factor: 4.562

Review 10.  The role of notch in promoting glial and neural stem cell fates.

Authors:  Nicholas Gaiano; Gord Fishell
Journal:  Annu Rev Neurosci       Date:  2002-03-25       Impact factor: 12.449

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  72 in total

Review 1.  Dynamic epigenetic regulation in neurons: enzymes, stimuli and signaling pathways.

Authors:  Antonella Riccio
Journal:  Nat Neurosci       Date:  2010-11       Impact factor: 24.884

Review 2.  Fine-tuning multiprotein complexes using small molecules.

Authors:  Andrea D Thompson; Amanda Dugan; Jason E Gestwicki; Anna K Mapp
Journal:  ACS Chem Biol       Date:  2012-07-23       Impact factor: 5.100

3.  E2a is necessary for Smad2/3-dependent transcription and the direct repression of lefty during gastrulation.

Authors:  Andrea E Wills; Julie C Baker
Journal:  Dev Cell       Date:  2015-02-09       Impact factor: 12.270

Review 4.  Nucleosome remodeling and epigenetics.

Authors:  Peter B Becker; Jerry L Workman
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-09-01       Impact factor: 10.005

5.  BAF chromatin remodeling complex: cortical size regulation and beyond.

Authors:  Tran Cong Tuoc; Ramanathan Narayanan; Anastassia Stoykova
Journal:  Cell Cycle       Date:  2013-08-13       Impact factor: 4.534

6.  Dual roles of Akirin2 protein during Xenopus neural development.

Authors:  Xiaoliang Liu; Yingjie Xia; Jixin Tang; Li Ma; Chaocui Li; Pengcheng Ma; Bingyu Mao
Journal:  J Biol Chem       Date:  2017-02-13       Impact factor: 5.157

Review 7.  Histone regulation in the CNS: basic principles of epigenetic plasticity.

Authors:  Ian Maze; Kyung-Min Noh; C David Allis
Journal:  Neuropsychopharmacology       Date:  2012-07-25       Impact factor: 7.853

8.  The SWI/SNF chromatin remodeling complex selectively affects multiple aspects of serotonergic neuron differentiation.

Authors:  Peter Weinberg; Nuria Flames; Hitoshi Sawa; Gian Garriga; Oliver Hobert
Journal:  Genetics       Date:  2013-03-02       Impact factor: 4.562

9.  The role of components of the chromatin modification machinery in carcinogenesis of clear cell carcinoma of the ovary (Review).

Authors:  Hiroshi Shigetomi; Akira Oonogi; Taihei Tsunemi; Yasuhito Tanase; Yoshihiko Yamada; Hirotaka Kajihara; Yoriko Yoshizawa; Naoto Furukawa; Shoji Haruta; Shozo Yoshida; Toshiyuki Sado; Hidekazu Oi; Hiroshi Kobayashi
Journal:  Oncol Lett       Date:  2011-05-16       Impact factor: 2.967

10.  Differential responses to retinoic acid and endocrine disruptor compounds of subpopulations within human embryonic stem cell lines.

Authors:  Lois A Annab; Carl D Bortner; Marie I Sifre; Jennifer M Collins; Ruchir R Shah; Darlene Dixon; H Karimi Kinyamu; Trevor K Archer
Journal:  Differentiation       Date:  2012-08-18       Impact factor: 3.880

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