Literature DB >> 17020388

Ultrafast two-dimensional infrared vibrational echo chemical exchange experiments and theory.

Kyungwon Kwak1, Junrong Zheng, Hu Cang, M D Fayer.   

Abstract

Ultrafast two-dimensional (2D) infrared vibrational echo experiments and theory are used to examine chemical exchange between solute-solvent complexes and the free solute for the solute phenol and three solvent complex partners, p-xylene, benzene, and bromobenzene, in mixed solvents of the partner and CCl4. The experiments measure the time evolution of the 2D spectra of the hydroxyl (OD) stretching mode of the phenol. The time-dependent 2D spectra are analyzed using time-dependent diagrammatic perturbation theory with a model that includes the chemical exchange (formation and dissociation of the complexes), spectral diffusion of both the complex and the free phenol, orientational relaxation of the complexes and free phenol, and the vibrational lifetimes. The detailed calculations are able to reproduce the experimental results and demonstrate that a method employed previously that used a kinetic model for the volumes of the peaks is adequate to extract the exchange kinetics. The current analysis also yields the spectral diffusion (time evolution of the dynamic line widths) and shows that the spectral diffusion is significantly different for phenol complexes and free phenol.

Entities:  

Year:  2006        PMID: 17020388     DOI: 10.1021/jp0624808

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  24 in total

Review 1.  Vibrational Spectroscopic Map, Vibrational Spectroscopy, and Intermolecular Interaction.

Authors:  Carlos R Baiz; Bartosz Błasiak; Jens Bredenbeck; Minhaeng Cho; Jun-Ho Choi; Steven A Corcelli; Arend G Dijkstra; Chi-Jui Feng; Sean Garrett-Roe; Nien-Hui Ge; Magnus W D Hanson-Heine; Jonathan D Hirst; Thomas L C Jansen; Kijeong Kwac; Kevin J Kubarych; Casey H Londergan; Hiroaki Maekawa; Mike Reppert; Shinji Saito; Santanu Roy; James L Skinner; Gerhard Stock; John E Straub; Megan C Thielges; Keisuke Tominaga; Andrei Tokmakoff; Hajime Torii; Lu Wang; Lauren J Webb; Martin T Zanni
Journal:  Chem Rev       Date:  2020-06-29       Impact factor: 60.622

2.  Echoes of a salty exchange.

Authors:  Damien Laage; James T Hynes
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-21       Impact factor: 11.205

3.  Direct observation of fast protein conformational switching.

Authors:  Haruto Ishikawa; Kyungwon Kwak; Jean K Chung; Seongheun Kim; Michael D Fayer
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-18       Impact factor: 11.205

4.  2D IR spectroscopy reveals the role of water in the binding of channel-blocking drugs to the influenza M2 channel.

Authors:  Ayanjeet Ghosh; Jun Wang; Yurii S Moroz; Ivan V Korendovych; Martin Zanni; William F DeGrado; Feng Gai; Robin M Hochstrasser
Journal:  J Chem Phys       Date:  2014-06-21       Impact factor: 3.488

5.  Testing for memory-free spectroscopic coordinates by 3D IR exchange spectroscopy.

Authors:  Joanna A Borek; Fivos Perakis; Peter Hamm
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-07       Impact factor: 11.205

6.  Protein dynamics studied with ultrafast two-dimensional infrared vibrational echo spectroscopy.

Authors:  Megan C Thielges; Michael D Fayer
Journal:  Acc Chem Res       Date:  2012-03-20       Impact factor: 22.384

7.  Hydrogen bond lifetimes and energetics for solute/solvent complexes studied with 2D-IR vibrational echo spectroscopy.

Authors:  Junrong Zheng; Michael D Fayer
Journal:  J Am Chem Soc       Date:  2007-03-21       Impact factor: 15.419

8.  The dynamics of peptide-water interactions in dialanine: An ultrafast amide I 2D IR and computational spectroscopy study.

Authors:  Chi-Jui Feng; Andrei Tokmakoff
Journal:  J Chem Phys       Date:  2017-08-28       Impact factor: 3.488

9.  Solute-solvent complex switching dynamics of chloroform between acetone and dimethylsulfoxide-two-dimensional IR chemical exchange spectroscopy.

Authors:  Kyungwon Kwak; Daniel E Rosenfeld; Jean K Chung; Michael D Fayer
Journal:  J Phys Chem B       Date:  2008-10-15       Impact factor: 2.991

10.  Applications of 2D IR spectroscopy to peptides, proteins, and hydrogen-bond dynamics.

Authors:  Yung Sam Kim; Robin M Hochstrasser
Journal:  J Phys Chem B       Date:  2009-06-18       Impact factor: 2.991

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