Literature DB >> 17004830

Raman microscopy for the chemometric analysis of tumor cells.

Ahcene Taleb1, James Diamond, John J McGarvey, J Renwick Beattie, Carla Toland, Peter W Hamilton.   

Abstract

Raman spectroscopy is recognized as a tool for chemometric analysis of biological materials due to the high information content relating to specific physical and chemical qualities of the sample. Thirty cells belonging to two different prostatic cell lines, PNT1A (immortalized normal prostate cell line) and LNCaP (malignant cell line derived from prostate metastases), were mapped using Raman microscopy. A range of spectral preprocessing methods (partial least-squares discriminant analyses (PLSDAs), principal component analyses (PCAs), and adjacent band ratios (ABRs)) were compared for input into linear discriminant analysis to model and classify the two cell lines. PLSDA and ABR were able to correctly classify 100% of cells into benign and malignant groups, while PLSDA correctly classified a greater proportion of individual spectra. PCA was used to image the distribution of various biochemicals inside each cell and confirm differences in composition/distribution between benign and malignant cell lines. This study has demonstrated that PLSDAs and ABRs of Raman data can identify subtle differences between benign and malignant prostatic cells in vitro.

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Mesh:

Year:  2006        PMID: 17004830     DOI: 10.1021/jp061981q

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  15 in total

1.  Quantitative ratiometric discrimination between noncancerous and cancerous prostate cells based on neuropilin-1 overexpression.

Authors:  Alessia Pallaoro; Gary B Braun; Martin Moskovits
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-19       Impact factor: 11.205

2.  Characterizing the intracellular distribution of metabolites in intact Chlamydia-infected cells by Raman and two-photon microscopy.

Authors:  Márta Szaszák; Jiun Chiun Chang; Weinan Leng; Jan Rupp; David M Ojcius; Anne Myers Kelley
Journal:  Microbes Infect       Date:  2013-03-27       Impact factor: 2.700

3.  Hyperspectral imaging and quantitative analysis for prostate cancer detection.

Authors:  Hamed Akbari; Luma V Halig; David M Schuster; Adeboye Osunkoya; Viraj Master; Peter T Nieh; Georgia Z Chen; Baowei Fei
Journal:  J Biomed Opt       Date:  2012-07       Impact factor: 3.170

Review 4.  Raman spectroscopy in biomedicine - non-invasive in vitro analysis of cells and extracellular matrix components in tissues.

Authors:  Eva Brauchle; Katja Schenke-Layland
Journal:  Biotechnol J       Date:  2012-11-19       Impact factor: 4.677

5.  A study of Docetaxel-induced effects in MCF-7 cells by means of Raman microspectroscopy.

Authors:  Katharina Hartmann; Melanie Becker-Putsche; Thomas Bocklitz; Katharina Pachmann; Axel Niendorf; Petra Rösch; Jürgen Popp
Journal:  Anal Bioanal Chem       Date:  2012-03-08       Impact factor: 4.142

6.  Eliminating Non-linear Raman Shift Displacement Between Spectrometers via Moving Window Fast Fourier Transform Cross-Correlation.

Authors:  Hui Chen; Yan Liu; Feng Lu; Yongbing Cao; Zhi-Min Zhang
Journal:  Front Chem       Date:  2018-10-25       Impact factor: 5.221

7.  Raman spectroscopy and its urological applications.

Authors:  Vishwanath S Hanchanale; Amrith R Rao; Sakti Das
Journal:  Indian J Urol       Date:  2008-10

Review 8.  Application of Raman spectroscopy in Andrology: non-invasive analysis of tissue and single cell.

Authors:  Yufei Liu; Yong Zhu; Zheng Li
Journal:  Transl Androl Urol       Date:  2014-03

Review 9.  Tip in-light on: Advantages, challenges, and applications of combining AFM and Raman microscopy on biological samples.

Authors:  Batirtze Prats-Mateu; Notburga Gierlinger
Journal:  Microsc Res Tech       Date:  2016-08-12       Impact factor: 2.769

10.  Embracing an integromic approach to tissue biomarker research in cancer: Perspectives and lessons learned.

Authors:  Gerald Li; Peter Bankhead; Philip D Dunne; Paul G O'Reilly; Jacqueline A James; Manuel Salto-Tellez; Peter W Hamilton; Darragh G McArt
Journal:  Brief Bioinform       Date:  2017-07-01       Impact factor: 11.622

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