Literature DB >> 16997972

BOX elements modulate gene expression in Streptococcus pneumoniae: impact on the fine-tuning of competence development.

Eivind Knutsen1, Ola Johnsborg, Yves Quentin, Jean-Pierre Claverys, Leiv Sigve Håvarstein.   

Abstract

More than 100 BOX elements are randomly distributed in intergenic regions of the pneumococcal genome. Here we demonstrate that these elements can affect expression of neighboring genes and present evidence that they are mobile. Together, our findings show that BOX elements enhance genetic diversity and genomic plasticity in Streptococcus pneumoniae.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16997972      PMCID: PMC1698192          DOI: 10.1128/JB.00850-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  20 in total

Review 1.  Extracellular-peptide control of competence for genetic transformation in Streptococcus pneumoniae.

Authors:  Jean-Pierre Claverys; Leiv Sigve Havarstein
Journal:  Front Biosci       Date:  2002-08-01

2.  The RNA degradosome and poly(A) polymerase of Escherichia coli are required in vivo for the degradation of small mRNA decay intermediates containing REP-stabilizers.

Authors:  Vanessa Khemici; Agamemnon J Carpousis
Journal:  Mol Microbiol       Date:  2004-02       Impact factor: 3.501

3.  Regulation of Streptococcus pneumoniae clp genes and their role in competence development and stress survival.

Authors:  A Chastanet; M Prudhomme; J P Claverys; T Msadek
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

4.  Complete genome sequence of a virulent isolate of Streptococcus pneumoniae.

Authors:  H Tettelin; K E Nelson; I T Paulsen; J A Eisen; T D Read; S Peterson; J Heidelberg; R T DeBoy; D H Haft; R J Dodson; A S Durkin; M Gwinn; J F Kolonay; W C Nelson; J D Peterson; L A Umayam; O White; S L Salzberg; M R Lewis; D Radune; E Holtzapple; H Khouri; A M Wolf; T R Utterback; C L Hansen; L A McDonald; T V Feldblyum; S Angiuoli; T Dickinson; E K Hickey; I E Holt; B J Loftus; F Yang; H O Smith; J C Venter; B A Dougherty; D A Morrison; S K Hollingshead; C M Fraser
Journal:  Science       Date:  2001-07-20       Impact factor: 47.728

5.  Repeated extragenic sequences in prokaryotic genomes: a proposal for the origin and dynamics of the RUP element in Streptococcus pneumoniae.

Authors:  M R Oggioni; J P Claverys
Journal:  Microbiology       Date:  1999-10       Impact factor: 2.777

6.  Genome of the bacterium Streptococcus pneumoniae strain R6.

Authors:  J Hoskins; W E Alborn; J Arnold; L C Blaszczak; S Burgett; B S DeHoff; S T Estrem; L Fritz; D J Fu; W Fuller; C Geringer; R Gilmour; J S Glass; H Khoja; A R Kraft; R E Lagace; D J LeBlanc; L N Lee; E J Lefkowitz; J Lu; P Matsushima; S M McAhren; M McHenney; K McLeaster; C W Mundy; T I Nicas; F H Norris; M O'Gara; R B Peery; G T Robertson; P Rockey; P M Sun; M E Winkler; Y Yang; M Young-Bellido; G Zhao; C A Zook; R H Baltz; S R Jaskunas; P R Rosteck; P L Skatrud; J I Glass
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

7.  Frequent oligonucleotide motifs in genomes of three streptococci.

Authors:  Jan Mrázek; Lisa H Gaynon; Samuel Karlin
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

8.  Genome analysis and strain comparison of correia repeats and correia repeat-enclosed elements in pathogenic Neisseria.

Authors:  Shi V Liu; Nigel J Saunders; Alex Jeffries; Richard F Rest
Journal:  J Bacteriol       Date:  2002-11       Impact factor: 3.490

Review 9.  RNA processing and degradation in Bacillus subtilis.

Authors:  Ciarán Condon
Journal:  Microbiol Mol Biol Rev       Date:  2003-06       Impact factor: 11.056

Review 10.  Degradation of RNA in bacteria: comparison of mRNA and stable RNA.

Authors:  Murray P Deutscher
Journal:  Nucleic Acids Res       Date:  2006-02-01       Impact factor: 16.971

View more
  20 in total

1.  Genome annotation and intraviral interactome for the Streptococcus pneumoniae virulent phage Dp-1.

Authors:  Mourad Sabri; Roman Häuser; Marc Ouellette; Jing Liu; Mohammed Dehbi; Greg Moeck; Ernesto García; Björn Titz; Peter Uetz; Sylvain Moineau
Journal:  J Bacteriol       Date:  2010-11-19       Impact factor: 3.490

2.  Very small mobile repeated elements in cyanobacterial genomes.

Authors:  Jeff Elhai; Michiko Kato; Sarah Cousins; Peter Lindblad; José Luis Costa
Journal:  Genome Res       Date:  2008-07-03       Impact factor: 9.043

3.  Population structure of hyperinvasive serotype 12F, clonal complex 218 Streptococcus pneumoniae revealed by multilocus boxB sequence typing.

Authors:  Alexey V Rakov; Kimiko Ubukata; D Ashley Robinson
Journal:  Infect Genet Evol       Date:  2011-08-25       Impact factor: 3.342

4.  Genetic regulation of the yefM-yoeB toxin-antitoxin locus of Streptococcus pneumoniae.

Authors:  Wai Ting Chan; Concha Nieto; Jennifer Ann Harikrishna; Seok Kooi Khoo; Rofina Yasmin Othman; Manuel Espinosa; Chew Chieng Yeo
Journal:  J Bacteriol       Date:  2011-07-15       Impact factor: 3.490

Review 5.  Toxin-antitoxin genes of the Gram-positive pathogen Streptococcus pneumoniae: so few and yet so many.

Authors:  Wai Ting Chan; Inma Moreno-Córdoba; Chew Chieng Yeo; Manuel Espinosa
Journal:  Microbiol Mol Biol Rev       Date:  2012-12       Impact factor: 11.056

6.  Roles of rel(Spn) in stringent response, global regulation and virulence of serotype 2 Streptococcus pneumoniae D39.

Authors:  Krystyna M Kazmierczak; Kyle J Wayne; Andreas Rechtsteiner; Malcolm E Winkler
Journal:  Mol Microbiol       Date:  2009-05       Impact factor: 3.501

7.  Variation in the genomic locations and sequence conservation of STAR elements among staphylococcal species provides insight into DNA repeat evolution.

Authors:  Joanne Purves; Matthew Blades; Yasrab Arafat; Salman A Malik; Christopher D Bayliss; Julie A Morrissey
Journal:  BMC Genomics       Date:  2012-09-28       Impact factor: 3.969

8.  Identification, variation and transcription of pneumococcal repeat sequences.

Authors:  Nicholas J Croucher; Georgios S Vernikos; Julian Parkhill; Stephen D Bentley
Journal:  BMC Genomics       Date:  2011-02-18       Impact factor: 3.969

9.  Multiple-locus variable number tandem repeat analysis for Streptococcus pneumoniae: comparison with PFGE and MLST.

Authors:  Karin E M Elberse; Sónia Nunes; Raquel Sá-Leão; Han G J van der Heide; Leo M Schouls
Journal:  PLoS One       Date:  2011-05-26       Impact factor: 3.240

10.  Impact of small repeat sequences on bacterial genome evolution.

Authors:  Nicholas Delihas
Journal:  Genome Biol Evol       Date:  2011-07-29       Impact factor: 3.416

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.